/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/unit_test/gff3writer_test_cases/ |
H A D | mss-389-frameshift.align.gff3 | 4 …4d7a-98fc-1b2d1c3f39c4;Target=NP_001243987.1 2 1765 +;align_length=5296;gap_count=5;genomic_gap_le… 6 …d4-4895-951a-42c1c1501a19;Target=BAJ78738.1 25 1093 +;align_length=3215;gap_count=6;genomic_gap_le… 8 …ea-491e-b528-ab55ea6e6eab;Target=BAJ78772.1 15 1082 +;align_length=3215;gap_count=4;genomic_gap_le… 10 …0d-497f-9b83-83e325c9b725;Target=BAJ78757.1 21 1087 +;align_length=3203;gap_count=5;genomic_gap_le… 12 …2a-4d65-a106-d06fd741d175;Target=BAJ78774.1 23 1089 +;align_length=3203;gap_count=6;genomic_gap_le… 14 …6d-4944-b62a-f25c8d1ce6c6;Target=BAJ78758.1 22 1087 +;align_length=3203;gap_count=6;genomic_gap_le… 16 …f6-4e3f-b3e2-1ffebcec6e6a;Target=BAJ78747.1 26 1088 +;align_length=3206;gap_count=7;genomic_gap_le… 18 …e0-4cdf-80a8-605b58c7218f;Target=BAJ78760.1 44 1087 +;align_length=3134;gap_count=4;genomic_gap_le… 20 …ef-4dd5-80ca-b575e957ac65;Target=BAJ78737.1 50 1093 +;align_length=3134;gap_count=4;genomic_gap_le… 22 …c6-4c44-9cb8-b003a946850a;Target=BAJ78744.1 51 1084 +;align_length=3125;gap_count=6;genomic_gap_le…
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H A D | mss-389-reverse-shift.align.gff3 | 4 …c-4347-9b16-0ba39c5772dd;Target=WP_009885996.1 1 135 +;align_length=405;gap_count=1;genomic_gap_le… 6 …3-41c6-85d9-1d258cba9b4f;Target=WP_014894208.1 1 227 +;align_length=699;gap_count=5;genomic_gap_le… 8 …0-4e35-9bd7-415c0432f308;Target=WP_014893959.1 1 153 +;align_length=477;gap_count=4;genomic_gap_le… 10 …d-4c97-86f4-6a4e8dab2972;Target=WP_014894609.1 2 221 +;align_length=672;gap_count=3;genomic_gap_le… 12 …b9d-6137-45e7-ad7c-75306f5dac55;Target=Q9EXD1.1 1 95 +;align_length=285;gap_count=1;genomic_gap_le…
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H A D | mss-389-reverse-shift.align.asn | 50 id str "gap_count", 156 id str "gap_count", 269 id str "gap_count", 380 id str "gap_count", 488 id str "gap_count",
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H A D | mss-389-frameshift.align.asn | 50 id str "gap_count", 189 id str "gap_count", 327 id str "gap_count", 464 id str "gap_count", 600 id str "gap_count", 738 id str "gap_count", 876 id str "gap_count", 1016 id str "gap_count", 1150 id str "gap_count", 1284 id str "gap_count",
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/dports/net/wireshark/wireshark-3.6.1/wiretap/ |
H A D | camins.c | 129 guint8 gap_count = 0; in detect_camins_file() local 144 gap_count++; in detect_camins_file() 145 if (gap_count > 5) { in detect_camins_file() 159 gap_count = 0; in detect_camins_file() 163 gap_count = 0; in detect_camins_file() 167 gap_count = 0; in detect_camins_file() 171 gap_count = 0; in detect_camins_file()
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/dports/net/wireshark-lite/wireshark-3.6.1/wiretap/ |
H A D | camins.c | 129 guint8 gap_count = 0; in detect_camins_file() local 144 gap_count++; in detect_camins_file() 145 if (gap_count > 5) { in detect_camins_file() 159 gap_count = 0; in detect_camins_file() 163 gap_count = 0; in detect_camins_file() 167 gap_count = 0; in detect_camins_file() 171 gap_count = 0; in detect_camins_file()
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/dports/net/tshark-lite/wireshark-3.6.1/wiretap/ |
H A D | camins.c | 129 guint8 gap_count = 0; in detect_camins_file() local 144 gap_count++; in detect_camins_file() 145 if (gap_count > 5) { in detect_camins_file() 159 gap_count = 0; in detect_camins_file() 163 gap_count = 0; in detect_camins_file() 167 gap_count = 0; in detect_camins_file() 171 gap_count = 0; in detect_camins_file()
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/dports/net/tshark/wireshark-3.6.1/wiretap/ |
H A D | camins.c | 129 guint8 gap_count = 0; 144 gap_count++; 145 if (gap_count > 5) { 159 gap_count = 0; 163 gap_count = 0; 167 gap_count = 0; 171 gap_count = 0;
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/dports/science/py-obspy/obspy-1.2.2/obspy/scripts/ |
H A D | sds_html_report.py | 167 net, sta, loc, cha, latency, percentage, gap_count = latency_tuple 177 gap_count > args.gaps_warn): 190 if gap_count > args.gaps_warn: 191 gap_count_string = "{:*>4d}#".format(gap_count) 407 percentage, gap_count = client.get_availability_percentage( 410 nslc_.append((net, sta, loc, cha, latency, percentage, gap_count)) 434 for net, sta, loc, cha, latency, percentage, gap_count in nslc: 439 data.append((net, sta, loc, cha, latency, percentage, gap_count))
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/mergetree/tests/ |
H A D | NC_000001_9_NC_000001_11.asnt | 22 id str "gap_count", 140 id str "gap_count", 478 id str "gap_count", 1076 id str "gap_count", 1174 id str "gap_count", 1312 id str "gap_count", 1400 id str "gap_count", 1498 id str "gap_count", 1896 id str "gap_count", 2034 id str "gap_count", [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/util/unit_test/data/ |
H A D | 157696450.asn | 34 id str "gap_count", 105 id str "gap_count", 466 id str "gap_count", 967 id str "gap_count", 1458 id str "gap_count", 1689 id str "gap_count", 2520 id str "gap_count", 2691 id str "gap_count", 4672 id str "gap_count", 5213 id str "gap_count", [all …]
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H A D | 157696307.asn | 34 id str "gap_count", 1005 id str "gap_count", 1276 id str "gap_count", 1457 id str "gap_count", 1698 id str "gap_count", 2139 id str "gap_count", 2300 id str "gap_count", 2441 id str "gap_count", 3112 id str "gap_count", 3463 id str "gap_count", [all …]
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/bitset/ |
H A D | bmxor.h | 104 unsigned gap_count = 1; in bit_block_xor_change32() local 113 gap_count += bm::word_bitcount(w); in bit_block_xor_change32() 121 ++gap_count; in bit_block_xor_change32() 124 gap_count -= !w_prev; in bit_block_xor_change32() 130 gap_count += bm::word_bitcount(w); in bit_block_xor_change32() 140 *gc = gap_count; in bit_block_xor_change32() 159 unsigned gap_count = 1; in bit_block_xor_change64() local 171 gap_count += bm::word_bitcount64(w); in bit_block_xor_change64() 179 ++gap_count; in bit_block_xor_change64() 182 gap_count -= !w_prev; in bit_block_xor_change64() [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/bitset/ |
H A D | bmxor.h | 104 unsigned gap_count = 1; in bit_block_xor_change32() local 113 gap_count += bm::word_bitcount(w); in bit_block_xor_change32() 121 ++gap_count; in bit_block_xor_change32() 124 gap_count -= !w_prev; in bit_block_xor_change32() 130 gap_count += bm::word_bitcount(w); in bit_block_xor_change32() 140 *gc = gap_count; in bit_block_xor_change32() 159 unsigned gap_count = 1; in bit_block_xor_change64() local 171 gap_count += bm::word_bitcount64(w); in bit_block_xor_change64() 179 ++gap_count; in bit_block_xor_change64() 182 gap_count -= !w_prev; in bit_block_xor_change64() [all …]
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/dports/multimedia/libv4l/linux-5.13-rc2/drivers/firewire/ |
H A D | core-card.c | 293 int gap_count, generation, grace, rcode; in bm_work() local 467 gap_count = gap_count_table[root_node->max_hops]; in bm_work() 469 gap_count = 63; in bm_work() 478 (card->gap_count != gap_count || new_root_id != root_id)) in bm_work() 485 new_root_id, gap_count); in bm_work() 486 fw_send_phy_config(card, new_root_id, generation, gap_count); in bm_work()
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H A D | core-topology.c | 177 int gap_count; in build_tree() local 187 gap_count = SELF_ID_GAP_COUNT(*sid); in build_tree() 291 if (SELF_ID_GAP_COUNT(q) != gap_count) in build_tree() 292 gap_count = 0; in build_tree() 302 card->gap_count = gap_count; in build_tree()
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/dports/multimedia/v4l-utils/linux-5.13-rc2/drivers/firewire/ |
H A D | core-card.c | 293 int gap_count, generation, grace, rcode; in bm_work() local 467 gap_count = gap_count_table[root_node->max_hops]; in bm_work() 469 gap_count = 63; in bm_work() 478 (card->gap_count != gap_count || new_root_id != root_id)) in bm_work() 485 new_root_id, gap_count); in bm_work() 486 fw_send_phy_config(card, new_root_id, generation, gap_count); in bm_work()
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H A D | core-topology.c | 177 int gap_count; in build_tree() local 187 gap_count = SELF_ID_GAP_COUNT(*sid); in build_tree() 291 if (SELF_ID_GAP_COUNT(q) != gap_count) in build_tree() 292 gap_count = 0; in build_tree() 302 card->gap_count = gap_count; in build_tree()
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/dports/multimedia/v4l_compat/linux-5.13-rc2/drivers/firewire/ |
H A D | core-card.c | 293 int gap_count, generation, grace, rcode; in bm_work() local 467 gap_count = gap_count_table[root_node->max_hops]; in bm_work() 469 gap_count = 63; in bm_work() 478 (card->gap_count != gap_count || new_root_id != root_id)) in bm_work() 485 new_root_id, gap_count); in bm_work() 486 fw_send_phy_config(card, new_root_id, generation, gap_count); in bm_work()
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H A D | core-topology.c | 177 int gap_count; in build_tree() local 187 gap_count = SELF_ID_GAP_COUNT(*sid); in build_tree() 291 if (SELF_ID_GAP_COUNT(q) != gap_count) in build_tree() 292 gap_count = 0; in build_tree() 302 card->gap_count = gap_count; in build_tree()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/gff3reader_test_cases/ |
H A D | rw-228.gff3 | 172 …4.5 1 182 +;consensus_splices=10;exon_identity=0.980574;for_remapping=0;gap_count=1;identity=0.980… 176 …5 635 738 +;consensus_splices=10;exon_identity=0.980574;for_remapping=0;gap_count=1;identity=0.980… 179 …94.4 1 80 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 180 ….4 81 217 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 181 …4 218 307 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 182 …4 308 514 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 183 …4 515 657 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 184 …4 658 761 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 193 …59.3 1 48 +;consensus_splices=16;exon_identity=0.988609;for_remapping=0;gap_count=2;identity=0.988… 203 …74-469e-a569-ee976ea3baa9;Target=XM_017319046.1 1 235 +;for_remapping=2;gap_count=1;num_ident=2423… [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/gff3reader_test_cases_genbank/ |
H A D | rw-228.gff3 | 172 …4.5 1 182 +;consensus_splices=10;exon_identity=0.980574;for_remapping=0;gap_count=1;identity=0.980… 176 …5 635 738 +;consensus_splices=10;exon_identity=0.980574;for_remapping=0;gap_count=1;identity=0.980… 179 …94.4 1 80 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 180 ….4 81 217 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 181 …4 218 307 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 182 …4 308 514 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 183 …4 515 657 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 184 …4 658 761 +;consensus_splices=12;exon_identity=0.961102;for_remapping=0;gap_count=2;identity=0.961… 193 …59.3 1 48 +;consensus_splices=16;exon_identity=0.988609;for_remapping=0;gap_count=2;identity=0.988… 203 …74-469e-a569-ee976ea3baa9;Target=XM_017319046.1 1 235 +;for_remapping=2;gap_count=1;num_ident=2423… [all …]
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/dports/print/lilypond-devel/lilypond-2.23.5/lily/ |
H A D | chord-tremolo-engraver.cc | 123 int gap_count = std::min (flags, intlog2 (repeat_count) + 1); in acknowledge_stem() local 143 set_property (beam_, "gap-count", to_scm (gap_count)); in acknowledge_stem()
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/dports/print/lilypond/lilypond-2.22.1/lily/ |
H A D | chord-tremolo-engraver.cc | 124 int gap_count = std::min (flags, intlog2 (repeat_count) + 1); in acknowledge_stem() local 144 set_property (beam_, "gap-count", to_scm (gap_count)); in acknowledge_stem()
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/dports/misc/rump/buildrump.sh-b914579/src/sys/dev/ieee1394/ |
H A D | fwphyreg.h | 52 gap_count:6; member 81 uint8_t gap_count:6,
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