| /dports/math/xlife++/xlifepp-sources-v2.0.1-2018-05-09/tests/res/ |
| H A D | unit_Domain.res | 15 geometric side element 51 : side 3 of element 1
16 geometric side element 52 : side 3 of element 3
17 geometric side element 53 : side 3 of element 5
18 geometric side element 54 : side 3 of element 7
19 geometric side element 55 : side 3 of element 9
21 geometric side element 56 : side 3 of element 42
22 geometric side element 57 : side 3 of element 44
23 geometric side element 58 : side 3 of element 46
24 geometric side element 59 : side 3 of element 48
25 geometric side element 60 : side 3 of element 50
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| H A D | unit_Mesh.res | 60 geometric side element 11 : side 2 of element 1
115 geometric side element 17 : side 3 of element 1
116 geometric side element 18 : side 3 of element 3
118 geometric side element 19 : side 2 of element 1
119 geometric side element 20 : side 2 of element 5
120 geometric side element 21 : side 2 of element 9
121 geometric side element 22 : side 2 of element 13
235 geometric side element 17 : side 3 of element 1
236 geometric side element 18 : side 3 of element 3
238 geometric side element 19 : side 2 of element 1
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| H A D | unit_Transformation.res | 189 geometric element 1 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
192 geometric element 2 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
195 geometric element 3 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
198 geometric element 4 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
201 geometric element 5 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
205 geometric element 8 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
245 geometric element 1 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
248 geometric element 2 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
251 geometric element 3 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
254 geometric element 4 (material 0, color 0) : triangle_Lagrange_1, orientation +0, linear map, measu…
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| H A D | unit_Space.res | 127 geometric side element 17 : side 3 of element 1
128 geometric side element 18 : side 3 of element 3
130 geometric side element 19 : side 2 of element 1
131 geometric side element 20 : side 2 of element 5
132 geometric side element 21 : side 2 of element 9
506 geometric side element 17 : side 3 of element 1
525 geometric side element 18 : side 3 of element 3
553 geometric side element 19 : side 2 of element 1
572 geometric side element 20 : side 2 of element 5
591 geometric side element 21 : side 2 of element 9
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| H A D | unit_GeomElement.res | 12 Side element S1_1 : geometric side element 4 : side 1 of element 1
16 Side element T1_2 : geometric side element 5 : side 2 of element 2
20 Side element T2_3 : geometric side element 6 : side 3 of element 3
49 - geometric reference element : shape segment, 2 vertices, 2 sides
63 - geometric reference element : shape segment, 2 vertices, 2 sides
76 geometric side element 5 : side 2 of element 2
83 geometric side element 6 : side 3 of element 3
102 - geometric reference element : shape segment, 2 vertices, 2 sides
110 - geometric reference element : shape segment, 2 vertices, 2 sides
118 - geometric reference element : shape segment, 2 vertices, 2 sides
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| /dports/misc/ompl/ompl-1.5.2/src/ompl/geometric/planners/ |
| H A D | AnytimePathShortening.cpp | 119 void ompl::geometric::AnytimePathShortening::addPath(const geometric::PathGeometricPtr &path, base:… in addPath()
137 geometric::PathHybridization phybrid(si_); in solve()
159 geometric::PathSimplifier ps(si_); in solve()
160 geometric::PathGeometric *sln = nullptr, *prevLastPath = nullptr; in solve()
221 geometric::PathSimplifier ps(si_); in threadSolve()
228 …geometric::PathGeometric *sln = static_cast<geometric::PathGeometric *>(pdef->getSolutionPath().ge… in threadSolve()
240 void ompl::geometric::AnytimePathShortening::clear() in clear()
264 void ompl::geometric::AnytimePathShortening::setup() in setup()
284 void ompl::geometric::AnytimePathShortening::checkValidity() in checkValidity()
301 bool ompl::geometric::AnytimePathShortening::isShortcutting() const in isShortcutting()
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| /dports/misc/ompl/ompl-1.5.2/tests/regression_tests/ |
| H A D | RegressionTestCirclesProblem.inl.h | 18 geometric::SimpleSetup *raw_ss = new geometric::SimpleSetup(si->getStateSpace()); in setupCirclesProblem()
21 …const_cast<geometric::PathSimplifierPtr&>(raw_ss->getPathSimplifier()).reset(new geometric::PathSi… in setupCirclesProblem()
23 geometric::SimpleSetup *raw_ss = new geometric::SimpleSetup(si); in setupCirclesProblem()
26 std::shared_ptr<geometric::SimpleSetup> ss(raw_ss); in setupCirclesProblem()
31 return std::shared_ptr<geometric::SimpleSetup>(); in setupCirclesProblem()
53 auto est(std::make_shared<geometric::EST>(si));
61 auto est(std::make_shared<geometric::BiEST>(si));
69 auto est(std::make_shared<geometric::ProjEST>(si));
78 auto sbl(std::make_shared<geometric::SBL>(si));
87 auto kpiece(std::make_shared<geometric::KPIECE1>(si));
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| H A D | RegressionTest.cpp | 106 void addAllPlanners(Benchmark &b, geometric::SimpleSetup &ss) in addAllPlanners()
109 addPlanner<geometric::EST, PROBLEM>(b, ss.getSpaceInformation()); in addAllPlanners()
111 addPlanner<geometric::SBL, PROBLEM>(b, ss.getSpaceInformation()); in addAllPlanners()
113 addPlanner<geometric::RRT, PROBLEM>(b, ss.getSpaceInformation()); in addAllPlanners()
118 addPlanner<geometric::KPIECE1, PROBLEM>(b, ss.getSpaceInformation()); in addAllPlanners()
119 addPlanner<geometric::BKPIECE1, PROBLEM>(b, ss.getSpaceInformation()); in addAllPlanners()
123 addPlanner<geometric::PRM, PROBLEM>(b, ss.getSpaceInformation()); in addAllPlanners()
127 addPlanner<geometric::PDST, PROBLEM>(b, ss.getSpaceInformation()); in addAllPlanners()
133 std::shared_ptr<geometric::SimpleSetup> setupProblem() in setupProblem()
138 return std::shared_ptr<geometric::SimpleSetup>(); in setupProblem()
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| /dports/science/cdk/cdk-cdk-2.3/tool/hash/src/test/java/org/openscience/cdk/hash/stereo/ |
| H A D | DoubleBond2DParityTest.java | 47 …GeometricParity geometric = new DoubleBond2DParity(new Point2d(-2.6518, 0.1473), new Point2d(-1.82… in unspecified() local
49 assertEquals(UNSPECIFIED, geometric.parity()); in unspecified()
54 …GeometricParity geometric = new DoubleBond2DParity(new Point2d(-2.6518, 0.1473), new Point2d(-1.82… in opposite() local
56 assertEquals(OPPOSITE, geometric.parity()); in opposite()
63 assertEquals(TOGETHER, geometric.parity()); in together()
70 assertEquals(UNSPECIFIED, geometric.parity()); in unspecified_both()
77 assertEquals(OPPOSITE, geometric.parity()); in opposite_inverted()
84 assertEquals(TOGETHER, geometric.parity()); in together_inverted()
92 assertEquals(OPPOSITE, geometric.parity()); in opposite30()
100 assertEquals(TOGETHER, geometric.parity()); in together30()
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| H A D | GeometryEncoderTest.java | 55 GeometricParity geometric = mock(GeometricParity.class); in testConstruction_Singleton() local
58 when(geometric.parity()).thenReturn(+1); in testConstruction_Singleton()
80 when(geometric.parity()).thenReturn(+1); in testEncode_Clockwise()
103 when(geometric.parity()).thenReturn(-1); in testEncode_Clockwise_Alt()
126 when(geometric.parity()).thenReturn(+1); in testEncode_Clockwise_Two()
149 when(geometric.parity()).thenReturn(+1); in testEncode_Anticlockwise()
172 when(geometric.parity()).thenReturn(-1); in testEncode_Anticlockwise_Alt()
195 when(geometric.parity()).thenReturn(+1); in testEncode_Anticlockwise_Two()
217 when(geometric.parity()).thenReturn(0); in testEncode_NoGeometry()
239 when(geometric.parity()).thenReturn(+1); in testEncode_NoPermutation()
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| H A D | DoubleBond3DParityTest.java | 46 …GeometricParity geometric = new DoubleBond3DParity(new Point3d(-4.6440, 0.4411, 0.5917), new Point… in opposite() local
48 assertEquals(OPPOSITE, geometric.parity()); in opposite()
53 …GeometricParity geometric = new DoubleBond3DParity(new Point3d(-4.6440, 0.4411, 0.5917), new Point… in together() local
55 assertEquals(TOGETHER, geometric.parity()); in together()
60 …GeometricParity geometric = new DoubleBond3DParity(new Point3d(-4.3262, 0.3192, 0.6495), new Point… in opposite_endOn() local
62 assertEquals(OPPOSITE, geometric.parity()); in opposite_endOn()
67 …GeometricParity geometric = new DoubleBond3DParity(new Point3d(-4.3262, 0.3192, 0.6495), new Point… in together_endOn() local
69 assertEquals(TOGETHER, geometric.parity()); in together_endOn()
75 …GeometricParity geometric = new DoubleBond3DParity(new Point3d(-4.6152, 0.3287, 0.5476), new Point… in opposite_torsion() local
77 assertEquals(OPPOSITE, geometric.parity()); in opposite_torsion()
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| /dports/science/py-geometric/geometric-0.9.7.2/geometric/tests/ |
| H A D | test_errors.py | 7 import geometric
8 from geometric.errors import EngineError, GeomOptNotConvergedError
62 M, engine = geometric.optimize.get_molecule_engine(**input_opts)
63 IC = geometric.internal.DelocalizedInternalCoordinates(M, build=True)
64 params = geometric.optimize.OptParams(**input_opts)
93 M, engine = geometric.optimize.get_molecule_engine(**input_opts)
94 IC = geometric.internal.DelocalizedInternalCoordinates(M, build=True)
95 params = geometric.optimize.OptParams(**input_opts)
126 M, engine = geometric.optimize.get_molecule_engine(**input_opts)
127 IC = geometric.internal.DelocalizedInternalCoordinates(M, build=True)
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| H A D | test_openmm.py | 9 import geometric
36 rmsd, maxd = geometric.optimize.calc_drms_dmax(progress.xyzs[-1], ref, align=True)
91 qdata = geometric.molecule.Molecule('qdata.txt')
96 rmsd, maxd = geometric.optimize.calc_drms_dmax(progress.xyzs[-1], ref, align=True)
110 scan_final = geometric.molecule.Molecule('scan-final.xyz')
123 scan_final = geometric.molecule.Molecule('scan-final.xyz')
134 coords = M.xyzs[0].flatten() * geometric.nifty.ang2bohr
135 …IC = geometric.internal.DelocalizedInternalCoordinates(M, build=True, connect=False, addcart=False)
136 …Gq_ana, Gq_num = geometric.optimize.CheckInternalGrad(coords, M, IC.Prims, engine, 'h2o2_h2o.tmp',…
137 …Hq_ana, Hq_num = geometric.optimize.CheckInternalHess(coords, M, IC.Prims, engine, 'h2o2_h2o.tmp',…
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| H A D | test_rotate.py | 6 import geometric
14 M = geometric.molecule.Molecule(os.path.join(datad, 'water5.xyz'))
17 a1, a2 = geometric.rotate.get_q_der(x, y, second=True, fdcheck=False)
18 l1, l2 = geometric.rotate.get_q_der(x, y, second=True, fdcheck=True, use_loops=True)
19 n1, n2 = geometric.rotate.get_q_der(x, y, second=True, fdcheck=True)
20 q = geometric.rotate.get_quat(x, y)
29 M = geometric.molecule.Molecule(os.path.join(datad, 'water5.xyz'))
32 a1, a2 = geometric.rotate.get_expmap_der(x, y, second=True, fdcheck=False)
33 l1, l2 = geometric.rotate.get_expmap_der(x, y, second=True, fdcheck=True, use_loops=True)
34 n1, n2 = geometric.rotate.get_expmap_der(x, y, second=True, fdcheck=True)
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| /dports/misc/ompl/ompl-1.5.2/src/ompl/geometric/planners/quotientspace/datastructures/src/ |
| H A D | QuotientSpaceGraph.cpp | 73 ompl::geometric::QuotientSpaceGraph::~QuotientSpaceGraph() in ~QuotientSpaceGraph()
77 void ompl::geometric::QuotientSpaceGraph::setup() in setup()
106 void ompl::geometric::QuotientSpaceGraph::clear() in clear()
140 void ompl::geometric::QuotientSpaceGraph::clearVertices() in clearVertices()
155 void ompl::geometric::QuotientSpaceGraph::clearQuery() in clearQuery()
166 void ompl::geometric::QuotientSpaceGraph::init() in init()
215 const ompl::geometric::QuotientSpaceGraph::Configuration *
221 ompl::geometric::QuotientSpaceGraph::Vertex ompl::geometric::QuotientSpaceGraph::addConfiguration(C… in addConfiguration()
242 const ompl::geometric::QuotientSpaceGraph::Graph &ompl::geometric::QuotientSpaceGraph::getGraph() c… in getGraph()
247 const ompl::geometric::QuotientSpaceGraph::RoadmapNeighborsPtr &
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| /dports/science/py-geometric/geometric-0.9.7.2/geometric/ |
| H A D | run_json.py | 4 import geometric
130 constraint["start"] *= geometric.nifty.bohr2ang
131 constraint["stop"] *= geometric.nifty.bohr2ang
133 constraint["value"] *= geometric.nifty.bohr2ang
166 M, engine = geometric.optimize.get_molecule_engine(**input_opts)
169 coords = M.xyzs[0].flatten() * geometric.nifty.ang2bohr
184 'cart': (geometric.internal.CartesianCoordinates, False, False),
201 if isinstance(IC, geometric.internal.CartesianCoordinates):
208 params = geometric.optimize.OptParams(**input_opts)
214 geometric.optimize.Optimize(coords, M, IC, engine, None, params)
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| /dports/finance/R-cran-PerformanceAnalytics/PerformanceAnalytics/R/ |
| H A D | charts.PerformanceSummary.R | 57 geometric=TRUE, argument
184 geometric = geometric,
205 geometric = geometric,
231 geometric = geometric,
250 geometric = geometric,
275 geometric = geometric,
295 geometric = geometric,
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| H A D | maxDrawdown.R | 44 maxDrawdown <- function (R, weights=NULL, geometric = TRUE, invert=TRUE, ...) argument
49 drawdown = Drawdowns(R, geometric = geometric)
57 result = apply(R, 2, maxDrawdown, geometric=geometric, invert=invert, ...=...)
64 portret<-Return.portfolio(R,weights=weights,geometric=geometric)
65 result<-maxDrawdown(portret, geometric=geometric, invert=invert, ...=...)
106 CDD <- function (R, weights=NULL, geometric = TRUE, invert=TRUE, p=.95 , ...) argument
121 result[i]<-CDD(R[,i,drop=FALSE],p=p, geometric=geometric, invert=invert, ...=...)
128 portret<-Return.portfolio(R,weights=weights,geometric=geometric)
129 result<-CDD(portret,p=p, geometric=geometric, invert=invert, ...=...)
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| /dports/misc/ompl/ompl-1.5.2/src/ompl/geometric/planners/quotientspace/algorithms/src/ |
| H A D | QRRTImpl.cpp | 51 ompl::geometric::QRRTImpl::~QRRTImpl() in ~QRRTImpl()
56 void ompl::geometric::QRRTImpl::setGoalBias(double goalBias) in setGoalBias()
61 double ompl::geometric::QRRTImpl::getGoalBias() const in getGoalBias()
66 void ompl::geometric::QRRTImpl::setRange(double maxDistance) in setRange()
71 double ompl::geometric::QRRTImpl::getRange() const in getRange()
76 void ompl::geometric::QRRTImpl::setup() in setup()
84 void ompl::geometric::QRRTImpl::clear() in clear()
89 bool ompl::geometric::QRRTImpl::getSolution(base::PathPtr &solution) in getSolution()
106 void ompl::geometric::QRRTImpl::grow() in grow()
162 double ompl::geometric::QRRTImpl::getImportance() const in getImportance()
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| /dports/math/R-cran-psych/psych/man/ |
| H A D | geometric.mean.Rd | 1 \name{geometric.mean}
2 \alias{geometric.mean}
3 \title{ Find the geometric mean of a vector or columns of a data.frame. }
4 \description{The geometric mean is the nth root of n products or e to the mean log of x.
5 Useful for describing non-normal, i.e., geometric distributions.
8 geometric.mean(x,na.rm=TRUE)
17 \value{geometric mean(s) of x or x.df.
30 geometric.mean(x)
31 geometric.mean(x2)
32 geometric.mean(X)
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| /dports/misc/ompl/ompl-1.5.2/src/ompl/geometric/src/ |
| H A D | SimpleSetup.cpp | 40 ompl::geometric::SimpleSetup::SimpleSetup(const base::SpaceInformationPtr &si) in SimpleSetup()
47 ompl::geometric::SimpleSetup::SimpleSetup(const base::StateSpacePtr &space) in SimpleSetup()
54 void ompl::geometric::SimpleSetup::setup() in setup()
77 void ompl::geometric::SimpleSetup::clear() in clear()
104 void ompl::geometric::SimpleSetup::setGoal(const base::GoalPtr &goal) in setGoal()
116 ompl::base::PlannerStatus ompl::geometric::SimpleSetup::solve(double time) in solve()
164 void ompl::geometric::SimpleSetup::simplifySolution(double duration) in simplifySolution()
187 const std::string ompl::geometric::SimpleSetup::getSolutionPlannerName() const in getSolutionPlannerName()
201 ompl::geometric::PathGeometric &ompl::geometric::SimpleSetup::getSolutionPath() const in getSolutionPath()
212 void ompl::geometric::SimpleSetup::getPlannerData(base::PlannerData &pd) const in getPlannerData()
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| /dports/devel/boost-docs/boost_1_72_0/libs/math/example/ |
| H A D | geometric_examples.cpp | 97 geometric g6(success_fraction); // type double by default. in main()
157 geometric g05(0.5); // Probability of success = 0.5 or 50% in main()
201 geometric g(0.02); // On average, 2 in 100 products are faulty. in main()
240 geometric gbest(0.95); in main()
242 geometric gmediocre(0.50); in main()
267 double t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
270 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
278 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
281 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
286 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
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| /dports/devel/boost-python-libs/boost_1_72_0/libs/math/example/ |
| H A D | geometric_examples.cpp | 97 geometric g6(success_fraction); // type double by default. in main()
157 geometric g05(0.5); // Probability of success = 0.5 or 50% in main()
201 geometric g(0.02); // On average, 2 in 100 products are faulty. in main()
240 geometric gbest(0.95); in main()
242 geometric gmediocre(0.50); in main()
267 double t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
270 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
278 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
281 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
286 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
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| /dports/databases/percona57-pam-for-mysql/boost_1_59_0/libs/math/example/ |
| H A D | geometric_examples.cpp | 97 geometric g6(success_fraction); // type double by default. in main()
157 geometric g05(0.5); // Probability of success = 0.5 or 50% in main()
201 geometric g(0.02); // On average, 2 in 100 products are faulty. in main()
240 geometric gbest(0.95); in main()
242 geometric gmediocre(0.50); in main()
267 double t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
270 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
278 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
281 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
286 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
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| /dports/databases/mysqlwsrep57-server/boost_1_59_0/libs/math/example/ |
| H A D | geometric_examples.cpp | 97 geometric g6(success_fraction); // type double by default. in main()
157 geometric g05(0.5); // Probability of success = 0.5 or 50% in main()
201 geometric g(0.02); // On average, 2 in 100 products are faulty. in main()
240 geometric gbest(0.95); in main()
242 geometric gmediocre(0.50); in main()
267 double t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
270 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
278 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
281 t = geometric::find_upper_bound_on_p(k, alpha/2); in main()
286 t = geometric::find_lower_bound_on_p(k, alpha/2); in main()
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