Searched refs:getGapDist (Results 1 – 3 of 3) sorted by relevance
1053 << userParameters->getGapDist() << "\n"; in gapPenaltiesMenu()1084 << userParameters->getGapDist() << "\n"; in gapPenaltiesMenu()1087 userParameters->getGapDist())); in gapPenaltiesMenu()
91 int getGapDist(){return gapDist;}; in getGapDist() function
94 gdist = userParameters->getGapDist(); in calcGapCoeff()