| /dports/science/jmol/jmol-14.32.7/src/org/jmol/modelset/ |
| H A D | Group.java | 416 public Quat getQuaternionFrame(Atom[] atoms) { in getQuaternionFrame() method in Group
420 return Quat.getQuaternionFrame(atoms[pt], atoms[++pt], atoms[++pt]); in getQuaternionFrame()
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| H A D | ModelSet.java | 3903 q = g.getQuaternionFrame(at); // non-PDB just use first three atoms in getAtomGroupQuaternions()
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/util/ |
| H A D | Tensor.java | 241 return Quat.getQuaternionFrame(null, eigenVectors[0], in getInfo()
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/export/ |
| H A D | ___Exporter.java | 456 Quat q = Quat.getQuaternionFrame(pt1, ptX, ptY); in getRotationMatrix()
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| H A D | _VrmlExporter.java | 197 A4 a = Quat.getQuaternionFrame(ptCenter, tempQ1, tempQ2).toAxisAngle4f(); in outputQuaternionFrame()
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| H A D | _ObjExporter.java | 240 A4 a = Quat.getQuaternionFrame(center, points[1], points[3]) in outputEllipsoid()
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| H A D | _IdtfExporter.java | 560 A4 a = Quat.getQuaternionFrame(center, points[1], points[3]).toAxisAngle4f(); in outputEllipsoid()
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/modelsetbio/ |
| H A D | BioExt.java | 110 char qtype = vwr.getQuaternionFrame(); in calculateStraightnessAll()
634 qtype = vwr.getQuaternionFrame(); in getPdbDataM()
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| /dports/science/jmol/jmol-14.32.7/src/javajs/util/ |
| H A D | Quat.java | 329 public static final Quat getQuaternionFrame(P3 center, T3 x, in getQuaternionFrame() method in Quat
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/symmetry/ |
| H A D | SymmetryDesc.java | 527 Quat.getQuaternionFrame(pt0, pt1, pt2) in createInfoArray()
528 .div(Quat.getQuaternionFrame(pta00, pta01, pta02))); in createInfoArray()
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| H A D | UnitCell.java | 633 return Quat.getQuaternionFrame(null, v, x).inv(); in getQuaternionRotation()
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/adapter/readers/xtal/ |
| H A D | CrystalReader.java | 909 matUnitCellOrientation = Quat.getQuaternionFrame(new P3(), a, b) in setUnitCellOrientation()
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/scriptext/ |
| H A D | MathExt.java | 1431 : vwr.ms.at[iAtom].group.getHelixData(tokType, vwr.getQuaternionFrame(), in getHelixData()
3094 q = Quat.getQuaternionFrame(P3.new3(0, 0, 0), pt0, pt1); in evaluateQuaternion()
3109 q = Quat.getQuaternionFrame(pts[0], pts[1], pts[2]); in evaluateQuaternion()
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| H A D | CmdExt.java | 747 vwr.addStateScript("set quaternionFrame '" + vwr.getQuaternionFrame()
3352 qFrame = " \"" + vwr.getQuaternionFrame() + "\""; in plot()
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/viewer/ |
| H A D | Viewer.java | 7693 return ms.getAtomGroupQuaternions(bsAtoms, nMax, getQuaternionFrame()); in getAtomGroupQuaternions()
8708 public char getQuaternionFrame() { in getQuaternionFrame() method in Viewer
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| /dports/science/jmol/jmol-14.32.7/src/org/jmol/script/ |
| H A D | ScriptEval.java | 5609 vwr.getQuaternionFrame())); in cmdMoveto()
6195 q = Quat.getQuaternionFrame(pts[n - 3], pts[n - 2], pts[n - 1]); in cmdRotate()
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