/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/copynumber/segmentation/ |
H A D | CopyRatioKernelSegmenterUnitTest.java | 69 … CopyRatioSegment(new SimpleInterval("1", 1, 1000), denoisedCopyRatios.getRecords().subList(0, 100… in dataCopyRatioKernelSegmenter() 70 …pyRatioSegment(new SimpleInterval("1", 1001, 2000), denoisedCopyRatios.getRecords().subList(100, 2… in dataCopyRatioKernelSegmenter() 71 …pyRatioSegment(new SimpleInterval("1", 2001, 2500), denoisedCopyRatios.getRecords().subList(200, 2… in dataCopyRatioKernelSegmenter() 72 …w CopyRatioSegment(new SimpleInterval("2", 1, 500), denoisedCopyRatios.getRecords().subList(250, 3… in dataCopyRatioKernelSegmenter() 73 …opyRatioSegment(new SimpleInterval("2", 501, 1500), denoisedCopyRatios.getRecords().subList(300, 4… in dataCopyRatioKernelSegmenter() 74 …pyRatioSegment(new SimpleInterval("2", 1501, 2500), denoisedCopyRatios.getRecords().subList(400, 5… in dataCopyRatioKernelSegmenter() 75 … CopyRatioSegment(new SimpleInterval("3", 1, 1000), denoisedCopyRatios.getRecords().subList(500, 6… in dataCopyRatioKernelSegmenter() 76 …pyRatioSegment(new SimpleInterval("3", 1001, 2000), denoisedCopyRatios.getRecords().subList(600, 7… in dataCopyRatioKernelSegmenter() 77 …pyRatioSegment(new SimpleInterval("3", 2001, 2500), denoisedCopyRatios.getRecords().subList(700, 7… in dataCopyRatioKernelSegmenter() 78 …w CopyRatioSegment(new SimpleInterval("4", 1, 500), denoisedCopyRatios.getRecords().subList(750, 8… in dataCopyRatioKernelSegmenter() [all …]
|
/dports/www/chromium-legacy/chromium-88.0.4324.182/services/device/nfc/android/junit/src/org/chromium/device/nfc/ |
H A D | NFCTest.java | 481 assertEquals(1, urlNdefMessage.getRecords().length); in testMojoToNdefConversion() 500 absUrlNdefMessage.getRecords()[0].getTnf()); in testMojoToNdefConversion() 569 assertEquals(1, mimeNdefMessage.getRecords().length); in testMojoToNdefConversion() 586 assertEquals(1, jsonNdefMessage.getRecords().length); in testMojoToNdefConversion() 616 assertEquals(1, extNdefMessage.getRecords().length); in testMojoToNdefConversion() 641 assertEquals(1, extNdefMessage1.getRecords().length); in testMojoToNdefConversion() 651 assertEquals(1, payloadMessage.getRecords().length); in testMojoToNdefConversion() 671 assertEquals(1, spNdefMessage.getRecords().length); in testMojoToNdefConversion() 681 assertEquals(7, payloadMessage.getRecords().length); in testMojoToNdefConversion() 764 assertEquals(1, payloadMessage.getRecords().length); in testMojoToNdefConversion() [all …]
|
/dports/dns/powerdns/pdns-4.5.2/pdns/ |
H A D | test-ueberbackend_cc.cc | 531 records = getRecords(ub, DNSName("geo.powerdns.com."), QType::ANY, 1, &pkt); in BOOST_AUTO_TEST_CASE() 584 records = getRecords(ub, DNSName("powerdns.org."), QType::SOA, -1, nullptr); in BOOST_AUTO_TEST_CASE() 596 records = getRecords(ub, DNSName("powerdns.org."), QType::ANY, -1, nullptr); in BOOST_AUTO_TEST_CASE() 608 records = getRecords(ub, DNSName("powerdns.org."), QType::AAAA, -1, nullptr); in BOOST_AUTO_TEST_CASE() 618 records = getRecords(ub, DNSName("powerdns.org."), QType::PTR, -1, nullptr); in BOOST_AUTO_TEST_CASE() 629 records = getRecords(ub, DNSName("powerdns.org."), QType::ANY, 2, nullptr); in BOOST_AUTO_TEST_CASE() 651 records = getRecords(ub, DNSName("powerdns.org."), QType::PTR, 2, nullptr); in BOOST_AUTO_TEST_CASE() 660 records = getRecords(ub, DNSName("powerdns.org."), QType::ANY, 1, nullptr); in BOOST_AUTO_TEST_CASE() 678 records = getRecords(ub, DNSName("geo.powerdns.com."), QType::ANY, 1, &pkt); in BOOST_AUTO_TEST_CASE() 804 records = getRecords(ub, DNSName("geo.powerdns.com."), QType::ANY, 1, &pkt); in BOOST_AUTO_TEST_CASE() [all …]
|
/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/services/device/nfc/android/junit/src/org/chromium/device/nfc/ |
H A D | NFCTest.java | 482 assertEquals(1, urlNdefMessage.getRecords().length); in testMojoToNdefConversion() 501 absUrlNdefMessage.getRecords()[0].getTnf()); in testMojoToNdefConversion() 570 assertEquals(1, mimeNdefMessage.getRecords().length); in testMojoToNdefConversion() 587 assertEquals(1, jsonNdefMessage.getRecords().length); in testMojoToNdefConversion() 617 assertEquals(1, extNdefMessage.getRecords().length); in testMojoToNdefConversion() 642 assertEquals(1, extNdefMessage1.getRecords().length); in testMojoToNdefConversion() 652 assertEquals(1, payloadMessage.getRecords().length); in testMojoToNdefConversion() 672 assertEquals(1, spNdefMessage.getRecords().length); in testMojoToNdefConversion() 682 assertEquals(7, payloadMessage.getRecords().length); in testMojoToNdefConversion() 765 assertEquals(1, payloadMessage.getRecords().length); in testMojoToNdefConversion() [all …]
|
/dports/games/openmw/openmw-openmw-0.47.0/apps/opencs/model/world/ |
H A D | infocollection.cpp | 41 index = std::distance (getRecords().begin(), range.second); in load() 68 return std::distance (getRecords().begin(), range.first); in getInfoIndex() 85 return std::distance (getRecords().begin(), range.second); in getAppendIndex() 162 return Range (getRecords().end(), getRecords().end()); in getTopicRange() 166 return Range (getRecords().end(), getRecords().end()); in getTopicRange() 168 RecordConstIterator begin = getRecords().begin()+iter->second; in getTopicRange() 170 while (begin != getRecords().begin()) in getTopicRange() 184 for (; end!=getRecords().end(); ++end) in getTopicRange()
|
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/copynumber/utils/annotatedinterval/ |
H A D | SimpleAnnotatedIntervalWriterUnitTest.java | 29 collection.getRecords().forEach(r -> writer.add(r)); in testNoSamFileHeaderWithComments() 39 Assert.assertEquals(testCollection.getRecords(), collection.getRecords()); in testNoSamFileHeaderWithComments() 52 collection.getRecords().forEach(r -> writer.add(r)); in testRoundTrip() 62 Assert.assertEquals(testCollection.getRecords(), collection.getRecords()); in testRoundTrip() 82 collection.getRecords().forEach(r -> writer.add(r)); in testRoundTripWithReplacementHeader() 92 Assert.assertEquals(testCollection.getRecords(), collection.getRecords()); in testRoundTripWithReplacementHeader()
|
H A D | AnnotatedIntervalCollectionUnitTest.java | 41 Assert.assertTrue(simpleAnnotatedGenomicRegions.getRecords().stream() in basicTest() 44 …Assert.assertTrue(simpleAnnotatedGenomicRegions.getRecords().stream().allMatch(s -> s.getAnnotatio… in basicTest() 65 …Assert.assertEquals(simpleAnnotatedGenomicRegions.getRecords().subList(0, gtRegions.size()), gtReg… in basicTest() 72 … AnnotatedIntervalCollection.create(TEST_FILE.toPath(), headersOfInterest).getRecords(); in testCreationFromList() 77 Assert.assertEquals(collection.getRecords(), annotatedIntervals); in testCreationFromList() 87 Assert.assertEquals(simpleAnnotatedGenomicRegions.getRecords().size(), 15); in basicTestWithAllColumnsFile() 88 Assert.assertTrue(simpleAnnotatedGenomicRegions.getRecords().stream() in basicTestWithAllColumnsFile() 98 Assert.assertEquals(simpleAnnotatedGenomicRegions.getRecords().size(), 15); in basicTestTribble() 99 Assert.assertTrue(simpleAnnotatedGenomicRegions.getRecords().stream() in basicTestTribble() 114 Assert.assertTrue(simpleAnnotatedGenomicRegions.getRecords().stream() in assertLearningSampleTest() [all …]
|
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/copynumber/utils/ |
H A D | MergeAnnotatedRegionsIntegrationTest.java | 39 Assert.assertEquals(collection.getRecords().size(), 5); in basicTest() 42 …Assert.assertEquals(collection.getRecords().get(0), new AnnotatedInterval(new SimpleInterval("1", … in basicTest() 44 …Assert.assertEquals(collection.getRecords().get(1), new AnnotatedInterval(new SimpleInterval("1", … in basicTest() 46 …Assert.assertEquals(collection.getRecords().get(2), new AnnotatedInterval(new SimpleInterval("1", … in basicTest() 48 …Assert.assertEquals(collection.getRecords().get(3), new AnnotatedInterval(new SimpleInterval("2", … in basicTest() 50 …Assert.assertEquals(collection.getRecords().get(4), new AnnotatedInterval(new SimpleInterval("2", … in basicTest()
|
H A D | CombineSegmentBreakpointsIntegrationTest.java | 72 …Assert.assertTrue(regions.getRecords().stream().allMatch(r -> r.getAnnotations().size() == columnS… in testRunWithExactSegments() 74 …Assert.assertTrue(regions.getRecords().stream().noneMatch(r -> r.getAnnotations().values().contain… in testRunWithExactSegments() 103 …Assert.assertTrue(regions.getRecords().stream().noneMatch(r -> r.getAnnotations().values().contain… in testRunWithExactSameFiles() 133 … Assert.assertTrue(regions.getRecords().stream().allMatch(r -> r.getAnnotations().size() == 4)); in testRunWithoutExactOverlaps() 134 …onedSegFiles(SEGMENT_CALL_1, SEGMENT_MEAN_1, SEGMENT_MEAN_2, SEGMENT_CALL_2, regions.getRecords()); in testRunWithoutExactOverlaps() 222 … Assert.assertTrue(regions.getRecords().stream().allMatch(r -> r.getAnnotations().size() == 4)); in testRunWithoutExactOverlapsAndLabels() 223 …onedSegFiles(SEGMENT_CALL_1, SEGMENT_MEAN_1, SEGMENT_MEAN_2, SEGMENT_CALL_2, regions.getRecords()); in testRunWithoutExactOverlapsAndLabels() 245 … Assert.assertTrue(regions.getRecords().stream().allMatch(r -> r.getAnnotations().size() == 4)); in testWithoutSamHeaderAndWithReference() 246 …onedSegFiles(SEGMENT_CALL_1, SEGMENT_MEAN_1, SEGMENT_MEAN_2, SEGMENT_CALL_2, regions.getRecords()); in testWithoutSamHeaderAndWithReference() 265 …Assert.assertTrue(regions.getRecords().stream().allMatch(r -> r.getAnnotations().size() == (1+3))); in testRunAndOneWithoutSamHeaderAndNoReference() [all …]
|
H A D | TagGermlineEventsIntegrationTest.java | 45 …atedInterval> regions = AnnotatedIntervalCollection.create(outputFile.toPath(), null).getRecords(); in testBasic() 53 …ollection.create(new File(TAG_GERMLINE_TUMOR_MATCHED_NORMAL_SEG_FILE).toPath(), null).getRecords(); in testBasic() 73 …atedInterval> regions = AnnotatedIntervalCollection.create(outputFile.toPath(), null).getRecords(); in testSlightlyDifferent() 81 …on.create(new File(TAG_GERMLINE_TUMOR_ALMOST_MATCHED_NORMAL_SEG_FILE).toPath(), null).getRecords(); in testSlightlyDifferent() 101 …atedInterval> regions = AnnotatedIntervalCollection.create(outputFile.toPath(), null).getRecords(); in testSlightlyDifferentAndSplit() 110 …ate(new File(TAG_GERMLINE_TUMOR_SPLIT_ALMOST_MATCHED_NORMAL_SEG_FILE).toPath(), null).getRecords(); in testSlightlyDifferentAndSplit() 130 …atedInterval> regions = AnnotatedIntervalCollection.create(outputFile.toPath(), null).getRecords(); in testTotallyDifferent() 138 …ction.create(new File(TAG_GERMLINE_TUMOR_NOT_MATCHED_NORMAL_SEG_FILE).toPath(), null).getRecords(); in testTotallyDifferent() 170 …atedInterval> regions = AnnotatedIntervalCollection.create(outputFile.toPath(), null).getRecords(); in testSplit() 179 ….create(new File(TAG_GERMLINE_TUMOR_SPLIT_NO_MATCHED_NORMAL_SEG_FILE).toPath(), null).getRecords(); in testSplit()
|
/dports/devel/hadoop2/hadoop-2.7.2-src/hadoop-yarn-project/hadoop-yarn/hadoop-yarn-server/hadoop-yarn-server-nodemanager/src/test/java/org/apache/hadoop/yarn/server/nodemanager/containermanager/monitor/ |
H A D | TestContainerMetrics.java | 56 assertEquals(ERR, 0, collector.getRecords().size()); in testContainerMetricsFlow() 60 assertEquals(ERR, 1, collector.getRecords().size()); in testContainerMetricsFlow() 65 assertEquals(ERR, 1, collector.getRecords().size()); in testContainerMetricsFlow() 70 assertEquals(ERR, 1, collector.getRecords().size()); in testContainerMetricsFlow() 74 assertEquals(ERR, 0, collector.getRecords().size()); in testContainerMetricsFlow() 78 assertEquals(ERR, 0, collector.getRecords().size()); in testContainerMetricsFlow() 103 assertEquals(ERR, 1, collector.getRecords().size()); in testContainerMetricsLimit() 104 MetricsRecord record = collector.getRecords().get(0); in testContainerMetricsLimit()
|
/dports/www/ilias/ILIAS-5.4.25/libs/composer/vendor/monolog/monolog/tests/Monolog/ |
H A D | SignalHandlerTest.php | 74 $this->assertCount(1, $handler->getRecords()); 76 $records = $handler->getRecords(); 105 $this->assertCount(0, $handler->getRecords()); 111 $this->assertCount(0, $handler->getRecords()); 115 $this->assertCount(1, $handler->getRecords()); 189 $this->assertCount(1, $handler->getRecords()); 236 $this->assertCount(1, $handler->getRecords()); 270 $this->assertCount($expectedBefore, $handler->getRecords()); 272 $this->assertCount($expectedAfter, $handler->getRecords());
|
/dports/www/orangehrm/orangehrm-4.9/symfony/lib/vendor/monolog/monolog/tests/Monolog/ |
H A D | SignalHandlerTest.php | 74 $this->assertCount(1, $handler->getRecords()); 76 $records = $handler->getRecords(); 105 $this->assertCount(0, $handler->getRecords()); 111 $this->assertCount(0, $handler->getRecords()); 115 $this->assertCount(1, $handler->getRecords()); 189 $this->assertCount(1, $handler->getRecords()); 236 $this->assertCount(1, $handler->getRecords()); 270 $this->assertCount($expectedBefore, $handler->getRecords()); 272 $this->assertCount($expectedAfter, $handler->getRecords());
|
/dports/www/ilias/ILIAS-5.4.25/libs/composer/vendor/monolog/monolog/tests/Monolog/Handler/ |
H A D | WhatFailureGroupHandlerTest.php | 41 $this->assertTrue(count($test->getRecords()) === 2); 56 $this->assertTrue(count($test->getRecords()) === 2); 86 $records = $test->getRecords(); 106 $this->assertTrue(count($test->getRecords()) === 2); 107 $records = $test->getRecords(); 128 $records = $test->getRecords();
|
H A D | GroupHandlerTest.php | 41 $this->assertTrue(count($test->getRecords()) === 2); 56 $this->assertTrue(count($test->getRecords()) === 2); 86 $records = $test->getRecords(); 106 $this->assertTrue(count($test->getRecords()) === 2); 107 $records = $test->getRecords();
|
H A D | BufferHandlerTest.php | 36 $this->assertTrue(count($test->getRecords()) === 2); 91 $this->assertCount(0, $test->getRecords()); 96 $this->assertCount(3, $test->getRecords()); 100 $this->assertCount(3, $test->getRecords()); 103 $this->assertCount(5, $test->getRecords()); 155 $records = $test->getRecords();
|
/dports/www/orangehrm/orangehrm-4.9/symfony/lib/vendor/monolog/monolog/tests/Monolog/Handler/ |
H A D | WhatFailureGroupHandlerTest.php | 41 $this->assertTrue(count($test->getRecords()) === 2); 56 $this->assertTrue(count($test->getRecords()) === 2); 86 $records = $test->getRecords(); 106 $this->assertTrue(count($test->getRecords()) === 2); 107 $records = $test->getRecords(); 128 $records = $test->getRecords();
|
H A D | GroupHandlerTest.php | 41 $this->assertTrue(count($test->getRecords()) === 2); 56 $this->assertTrue(count($test->getRecords()) === 2); 86 $records = $test->getRecords(); 106 $this->assertTrue(count($test->getRecords()) === 2); 107 $records = $test->getRecords();
|
H A D | BufferHandlerTest.php | 36 $this->assertTrue(count($test->getRecords()) === 2); 91 $this->assertCount(0, $test->getRecords()); 96 $this->assertCount(3, $test->getRecords()); 100 $this->assertCount(3, $test->getRecords()); 103 $this->assertCount(5, $test->getRecords()); 155 $records = $test->getRecords();
|
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/copynumber/formats/collections/ |
H A D | AbstractLocatableCollection.java | 47 …CopyNumberArgumentValidationUtils.validateIntervals(getRecords(), metadata.getSequenceDictionary()… in AbstractLocatableCollection() 48 this.overlapDetector = new Lazy<>(() -> OverlapDetector.create(getRecords())); in AbstractLocatableCollection() 59 …CopyNumberArgumentValidationUtils.validateIntervals(getRecords(), getMetadata().getSequenceDiction… in AbstractLocatableCollection() 60 this.overlapDetector = new Lazy<>(() -> OverlapDetector.create(getRecords())); in AbstractLocatableCollection() 77 return getRecords().stream() in getIntervals() 130 … ImmutablePair.of(shardIndex, collections.get(shardIndex).getRecords().get(0))) in getShardedCollectionSortOrder() 139 .map(idx -> collections.get(idx).getRecords()) in getShardedCollectionSortOrder()
|
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/copynumber/ |
H A D | ModelSegments.java | 497 if (!denoisedCopyRatios.getRecords().isEmpty() && hetAllelicCounts.getRecords().isEmpty()) { in doWork() 501 copyRatioSegments.getRecords().stream() in doWork() 504 …} else if (denoisedCopyRatios.getRecords().isEmpty() && !hetAllelicCounts.getRecords().isEmpty()) { in doWork() 508 alleleFractionSegments.getRecords().stream() in doWork() 550 modeller.getModeledSegments().getRecords().stream() in doWork() 559 modeller.getModeledSegments().getRecords().stream() in doWork() 636 filteredAllelicCounts.getRecords().stream() in genotypeHets() 647 filteredAllelicCounts.getRecords().stream() in genotypeHets() 662 filteredAllelicCounts.getRecords().stream() in genotypeHets() 689 normalAllelicCounts.getRecords().stream() in genotypeHets() [all …]
|
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/funcotator/ |
H A D | FuncotatorIntegrationTest.java | 1168 Assert.assertTrue(maf.getRecords().stream() in testVcfMafConcordance() 1413 Assert.assertTrue(maf.getRecords().size() > 0); in testVCFToMAFPreservesFields() 1463 Assert.assertTrue(maf.getRecords().size() > 0); in testVcfToMafHonorsExcludedFields() 1552 IntStream.range(0, maf.getRecords().size()).boxed() in testMafCustomCountFields() 1556 IntStream.range(0, maf.getRecords().size()).boxed() in testMafCustomCountFields() 1560 IntStream.range(0, maf.getRecords().size()).boxed() in testMafCustomCountFields() 1564 IntStream.range(0, maf.getRecords().size()).boxed() in testMafCustomCountFields() 1568 IntStream.range(0, maf.getRecords().size()).boxed() in testMafCustomCountFields() 1606 IntStream.range(0, maf.getRecords().size()).boxed() in testMafCustomCountFieldsTumorOnly() 1733 Assert.assertEquals(maf.getRecords().size(), 0); in testNoVariantsProduceMaf() [all …]
|
H A D | FuncotateSegmentsIntegrationTest.java | 73 Assert.assertEquals(collection.getRecords().size(), 3); in testSimpleNoOverlap() 74 Assert.assertTrue(collection.getRecords().stream().allMatch(r -> r.hasAnnotation("genes"))); in testSimpleNoOverlap() 75 …Assert.assertTrue(collection.getRecords().stream().allMatch(r -> r.getAnnotationValue("genes").equ… in testSimpleNoOverlap() 76 …Assert.assertTrue(collection.getRecords().stream().allMatch(r -> r.getAnnotationValue("start_gene"… in testSimpleNoOverlap() 77 …Assert.assertTrue(collection.getRecords().stream().allMatch(r -> r.getAnnotationValue("end_gene").… in testSimpleNoOverlap() 78 …Assert.assertTrue(collection.getRecords().stream().allMatch(r -> r.getAnnotationValue("start_exon"… in testSimpleNoOverlap() 79 …Assert.assertTrue(collection.getRecords().stream().allMatch(r -> r.getAnnotationValue("end_exon").… in testSimpleNoOverlap() 80 …Assert.assertTrue(collection.getRecords().stream().allMatch(r -> r.getAnnotationValue("ref_allele"… in testSimpleNoOverlap() 152 final List<AnnotatedInterval> segments = collection.getRecords(); in testSimpleMultipleGenesOverlap() 229 final List<AnnotatedInterval> segments = outputSegmentCollection.getRecords(); in testGatkCalledSegmentFile() [all …]
|
/dports/www/orangehrm/orangehrm-4.9/symfony/plugins/orangehrmTimePlugin/test/model/service/ |
H A D | TimesheetPeriodServiceTest.php | 67 …$xmlString = TestDataService::getRecords("SELECT value from hs_hr_config WHERE `key` = '" . $key .… 90 …$xmlString = TestDataService::getRecords("SELECT value from hs_hr_config WHERE `key` = '" . $key .… 137 …$xmlString = TestDataService::getRecords("SELECT value from hs_hr_config WHERE `key` = '" . $key .… 155 $xmlString = TestDataService::getRecords(
|
/dports/devel/xelfviewer/XELFViewer-0.03/XArchive/ |
H A D | xarchives.cpp | 28 QList<XArchive::RECORD> XArchives::getRecords(QIODevice *pDevice, qint32 nLimit) in getRecords() function in XArchives 39 listResult=xzip.getRecords(nLimit); in getRecords() 45 listResult=xmachofat.getRecords(nLimit); in getRecords() 51 QList<XArchive::RECORD> XArchives::getRecords(QString sFileName, qint32 nLimit) in getRecords() function in XArchives 61 listResult=getRecords(&file,nLimit); in getRecords() 169 QList<XArchive::RECORD> listRecords=getRecords(&file); in decompressToFile()
|