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Searched refs:getRegionSequence (Results 1 – 8 of 8) sorted by relevance

/dports/biology/ugene/ugene-40.1/src/corelibs/U2Core/src/tasks/
H A DSequenceDbiWalkerTask.h92 const QByteArray &getRegionSequence();
H A DSequenceWalkerTask.h111 const char *getRegionSequence();
H A DSequenceDbiWalkerTask.cpp152 const QByteArray &SequenceDbiWalkerSubtask::getRegionSequence() { in getRegionSequence() function in U2::SequenceDbiWalkerSubtask
H A DSequenceWalkerTask.cpp167 const char *SequenceWalkerSubtask::getRegionSequence() { in getRegionSequence() function in U2::SequenceWalkerSubtask
/dports/biology/ugene/ugene-40.1/src/corelibs/U2View/src/ov_sequence/sequence_info/
H A DCodonOccurTask.cpp79 const QByteArray &sequence = task->getRegionSequence(); in onRegion()
/dports/biology/ugene/ugene-40.1/src/plugins/repeat_finder/src/
H A DRF_SArray_TandemFinder.cpp178 quint64 offs = t->getRegionSequence() - t->getGlobalConfig().seq; in onRegion()
180 …regionTasks.append(new TandemFinder_Region(regionCount++, t->getRegionSequence(), t->getRegionSequ… in onRegion()
/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/hmm2/src/u_search/
H A DHMMSearchTask.cpp89 const char *localSeq = t->getRegionSequence(); in onRegion()
/dports/biology/ugene/ugene-40.1/src/plugins/smith_waterman/src/
H A DSWAlgorithmTask.cpp267 QByteArray localSeq(t->getRegionSequence(), regionLen); in onRegion()
578 QByteArray localSeq(t->getRegionSequence(), regionLen); in onRegion()