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Searched refs:get_bases (Results 1 – 25 of 76) sorted by relevance

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/dports/biology/sra-tools/sra-tools-2.11.0/ngs/ngs-sdk/adapter/
H A DFragmentItf.cpp61 …NGS_String_v1 * CC FragmentItf :: get_bases ( const NGS_Fragment_v1 * iself, NGS_ErrBlock_v1 * err, in get_bases() function in ngs_adapt::FragmentItf
120 get_bases,
H A DReadItf.cpp123 …NGS_String_v1 * CC ReadItf :: get_bases ( const NGS_Read_v1 * iself, NGS_ErrBlock_v1 * err, uint64… in get_bases() function in ngs_adapt::ReadItf
184 get_bases,
/dports/biology/ncbi-vdb/ngs-2.11.0/ngs-sdk/adapter/
H A DFragmentItf.cpp61 …NGS_String_v1 * CC FragmentItf :: get_bases ( const NGS_Fragment_v1 * iself, NGS_ErrBlock_v1 * err, in get_bases() function in ngs_adapt::FragmentItf
120 get_bases,
H A DReadItf.cpp123 …NGS_String_v1 * CC ReadItf :: get_bases ( const NGS_Read_v1 * iself, NGS_ErrBlock_v1 * err, uint64… in get_bases() function in ngs_adapt::ReadItf
184 get_bases,
/dports/biology/ngs-sdk/ngs-2.11.1/ngs-sdk/adapter/
H A DFragmentItf.cpp61 …NGS_String_v1 * CC FragmentItf :: get_bases ( const NGS_Fragment_v1 * iself, NGS_ErrBlock_v1 * err, in get_bases() function in ngs_adapt::FragmentItf
120 get_bases,
H A DReadItf.cpp123 …NGS_String_v1 * CC ReadItf :: get_bases ( const NGS_Read_v1 * iself, NGS_ErrBlock_v1 * err, uint64… in get_bases() function in ngs_adapt::ReadItf
184 get_bases,
/dports/databases/p5-Tangram/Tangram-2.12/lib/Tangram/Schema/
H A DNode.pm7 sub get_bases subroutine
12 *direct_bases = \&get_bases;
/dports/biology/sra-tools/sra-tools-2.11.0/ngs/ngs-sdk/dispatch/
H A DFragmentItf.cpp103 assert ( vt -> get_bases != 0 ); in getFragmentBases()
104 NGS_String_v1 * ret = ( * vt -> get_bases ) ( self, & err, offset, length ); in getFragmentBases()
H A DReadItf.cpp207 assert ( vt -> get_bases != 0 ); in getReadBases()
208 NGS_String_v1 * ret = ( * vt -> get_bases ) ( self, & err, offset, length ); in getReadBases()
/dports/biology/ncbi-vdb/ngs-2.11.0/ngs-sdk/dispatch/
H A DFragmentItf.cpp103 assert ( vt -> get_bases != 0 ); in getFragmentBases()
104 NGS_String_v1 * ret = ( * vt -> get_bases ) ( self, & err, offset, length ); in getFragmentBases()
H A DReadItf.cpp207 assert ( vt -> get_bases != 0 ); in getReadBases()
208 NGS_String_v1 * ret = ( * vt -> get_bases ) ( self, & err, offset, length ); in getReadBases()
/dports/biology/ngs-sdk/ngs-2.11.1/ngs-sdk/dispatch/
H A DFragmentItf.cpp103 assert ( vt -> get_bases != 0 ); in getFragmentBases()
104 NGS_String_v1 * ret = ( * vt -> get_bases ) ( self, & err, offset, length ); in getFragmentBases()
H A DReadItf.cpp207 assert ( vt -> get_bases != 0 ); in getReadBases()
208 NGS_String_v1 * ret = ( * vt -> get_bases ) ( self, & err, offset, length ); in getReadBases()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/ngs/
H A DNGS_ReferenceSequence.c190 assert ( vt -> get_bases != NULL ); in NGS_ReferenceSequenceInit()
259 return VT ( self, get_bases ) ( self, ctx, offset, size ); in NGS_ReferenceSequenceGetBases()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/ngs/
H A DNGS_ReferenceSequence.c190 assert ( vt -> get_bases != NULL ); in NGS_ReferenceSequenceInit()
259 return VT ( self, get_bases ) ( self, ctx, offset, size ); in NGS_ReferenceSequenceGetBases()
/dports/biology/sra-tools/sra-tools-2.11.0/ngs/ngs-sdk/ngs/itf/
H A DFragmentItf.h54 …NGS_String_v1 * ( CC * get_bases ) ( const NGS_Fragment_v1 * self, NGS_ErrBlock_v1 * err, uint64_t…
H A DReadItf.h57 …NGS_String_v1 * ( CC * get_bases ) ( const NGS_Read_v1 * self, NGS_ErrBlock_v1 * err, uint64_t off…
/dports/biology/ncbi-vdb/ngs-2.11.0/ngs-sdk/ngs/itf/
H A DFragmentItf.h54 …NGS_String_v1 * ( CC * get_bases ) ( const NGS_Fragment_v1 * self, NGS_ErrBlock_v1 * err, uint64_t…
H A DReadItf.h57 …NGS_String_v1 * ( CC * get_bases ) ( const NGS_Read_v1 * self, NGS_ErrBlock_v1 * err, uint64_t off…
/dports/biology/ngs-sdk/ngs-2.11.1/ngs-sdk/ngs/itf/
H A DFragmentItf.h54 …NGS_String_v1 * ( CC * get_bases ) ( const NGS_Fragment_v1 * self, NGS_ErrBlock_v1 * err, uint64_t…
H A DReadItf.h57 …NGS_String_v1 * ( CC * get_bases ) ( const NGS_Read_v1 * self, NGS_ErrBlock_v1 * err, uint64_t off…
/dports/biology/sra-tools/sra-tools-2.11.0/ngs/ngs-sdk/ngs/adapter/
H A DFragmentItf.hpp67 static NGS_String_v1 * CC get_bases ( const NGS_Fragment_v1 * self, NGS_ErrBlock_v1 * err,
/dports/biology/ncbi-vdb/ngs-2.11.0/ngs-sdk/ngs/adapter/
H A DFragmentItf.hpp67 static NGS_String_v1 * CC get_bases ( const NGS_Fragment_v1 * self, NGS_ErrBlock_v1 * err,
/dports/biology/ngs-sdk/ngs-2.11.1/ngs-sdk/ngs/adapter/
H A DFragmentItf.hpp67 static NGS_String_v1 * CC get_bases ( const NGS_Fragment_v1 * self, NGS_ErrBlock_v1 * err,
/dports/www/firefox-legacy/firefox-52.8.0esr/toolkit/mozapps/installer/
H A Dpackager.py396 def get_bases(): function
397 for b in sink.packager.get_bases(addons=False):
402 for base in sorted(get_bases()):

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