Searched refs:gseq_b (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/ |
| H A D | gnomon_seq.cpp | 459 right_edit_extra_seq += gseq_b; in InsertIndelRangesForInterval()
460 right_edite += gseq_b.length(); in InsertIndelRangesForInterval()
481 right_edit_extra_seq = gseq_b; in InsertIndelRangesForInterval()
497 …edit_a, len, mism, left_orige, left_edite, 0, gseq_b.length(), type_a, type_b, left_edit_extra_seq… in InsertIndelRangesForInterval()
534 string gseq_b; in CAlignMap() local
542 gseq_b = exons[i+1].m_seq; in CAlignMap()
546 ReverseComplement(gseq_b.begin(),gseq_b.end()); in CAlignMap()
580 string gseq_b; in CAlignMap() local
588 gseq_b = exons[i+1].m_seq; in CAlignMap()
592 ReverseComplement(gseq_b.begin(),gseq_b.end()); in CAlignMap()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/gnomon/ |
| H A D | gnomon_model.hpp | 725 …_iterator fsi_end, EEdgeType type_a, EEdgeType type_b, const string& gseq_a, const string& gseq_b);
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