Searched refs:gtf_gid (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/gffread/gffread-0.12.7/gclib/ |
| H A D | gff.cpp | 552 char *gtf_gid=NULL; in GffLine() local
572 gtf_gid=extractAttr("gene_id", true, true); in GffLine()
573 if (gtf_gid!=NULL) { in GffLine()
575 ensembl_GTF_ID_process(gtf_gid, "gene_version"); in GffLine()
707 gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); in GffLine()
708 if (gene_id!=NULL && gtf_gid==NULL && reader->procEnsemblID()) in GffLine()
729 gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); in GffLine()
731 if (gtf_gid==NULL && reader->procEnsemblID()) in GffLine()
741 …gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); // for GTF this is the o… in GffLine()
742 if (gene_id!=NULL && gtf_gid==NULL && reader->procEnsemblID()) in GffLine()
|
| /dports/biology/stringtie/stringtie-2.1.1/gclib/ |
| H A D | gff.cpp | 519 char *gtf_gid=NULL; in GffLine() local
528 gtf_gid=extractAttr("gene_id", true, true); in GffLine()
529 if (gtf_gid==NULL) return; //cannot determine file type yet in GffLine()
702 gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); in GffLine()
720 gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); in GffLine()
727 …gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); // for GTF this is the o… in GffLine()
|
| /dports/biology/libgff/libgff-2.0.0/src/ |
| H A D | gff.cpp | 519 char *gtf_gid=NULL; in GffLine() local
528 gtf_gid=extractAttr("gene_id", true, true); in GffLine()
529 if (gtf_gid==NULL) return; //cannot determine file type yet in GffLine()
702 gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); in GffLine()
720 gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); in GffLine()
727 …gene_id = (gtf_gid!=NULL) ? gtf_gid : extractAttr("gene_id", true, true); // for GTF this is the o… in GffLine()
|