Searched refs:haveGenome (Results 1 – 11 of 11) sorted by relevance
36 bool haveGenome = false; in random_main() local60 haveGenome = true; in random_main()91 if (!haveGenome) { in random_main()
42 bool haveGenome = false; in windowmaker_main() local67 haveGenome = true; in windowmaker_main()130 if (!haveGenome && !haveBed) { in windowmaker_main()134 if (haveGenome && haveBed) { in windowmaker_main()150 if (step <= 0 && !haveBed && !haveCount && haveGenome) { in windowmaker_main()
35 bool haveGenome = false; in shift_main() local69 haveGenome = true; in shift_main()109 if (!haveBed || !haveGenome) { in shift_main()
37 bool haveGenome = false; in flank_main() local72 haveGenome = true; in flank_main()115 if (!haveBed || !haveGenome) { in flank_main()
37 bool haveGenome = false; in slop_main() local72 haveGenome = true; in slop_main()115 if (!haveBed || !haveGenome) { in slop_main()
39 bool haveGenome = false; in shuffle_main() local77 haveGenome = true; in shuffle_main()138 if (!haveBed || !haveGenome) { in shuffle_main()
41 bool haveGenome = false; in genomecoverage_main() local96 haveGenome = true; in genomecoverage_main()187 if (!haveBed && !haveGenome && !bamInput) { in genomecoverage_main()192 if (bamInput && haveGenome) { in genomecoverage_main()
59 bool haveGenome = false; in bedtobam_main() local88 haveGenome = true; in bedtobam_main()117 if (!haveGenome ) { in bedtobam_main()
47 bool haveGenome = false; in multiintersect_main() local112 haveGenome = true; in multiintersect_main()
48 bool haveGenome = false; in unionbedgraphs_main() local112 haveGenome = true; in unionbedgraphs_main()
60 bool haveGenome = false; in bedpetobam_main() local89 haveGenome = true; in bedpetobam_main()115 if (!haveGenome ) { in bedpetobam_main()