Searched refs:hlinemap (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
| H A D | ajassemread.c | 1995 AjPTable hlinemap = NULL; in asseminReadSamHeader() local
2023 hlinemap = ajSeqBamHeaderLineParse(ajStrGetPtr(asseminReadLine)); in asseminReadSamHeader()
2024 if(!hlinemap) in asseminReadSamHeader()
2030 switch(((const char*)ajTableFetchC(hlinemap, "type"))[0]) in asseminReadSamHeader()
2044 cp = ajTableFetchC(hlinemap, "SO"); in asseminReadSamHeader()
2055 cp = ajTableFetchC(hlinemap, "SN"); in asseminReadSamHeader()
2064 cp = ajTableFetchC(hlinemap, "LN"); in asseminReadSamHeader()
2075 cp = ajTableFetchC(hlinemap, "ID"); in asseminReadSamHeader()
2078 ajTablePut(readgroups, ajCharNewC(cp), hlinemap); in asseminReadSamHeader()
2097 ajTableDel(&hlinemap); in asseminReadSamHeader()
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| H A D | ajseqbam.c | 2491 AjPTable hlinemap = NULL; in bamHeaderLineToTablemap() local
2495 hlinemap = ajTablecharNew(16); in bamHeaderLineToTablemap()
2496 ajTableSetDestroyvalue(hlinemap, &ajMemFree); in bamHeaderLineToTablemap()
2502 ajTablePut(hlinemap, ajCharNewResLenC(tag->key,3,2), in bamHeaderLineToTablemap()
2508 return hlinemap; in bamHeaderLineToTablemap()
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