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/dports/biology/star/STAR-2.7.9a/source/
H A DSoloFeature_emptyDrops_CR.cpp117 uint32 iCandFirst, iCandLast; //first/last candidate cell in the descending sorted indCount in emptyDrops_CR() local
119iCandFirst=filteredCells.nCellsSimple;//candidates start right after the cutoff for the simple fil… in emptyDrops_CR()
122 … for (iCandLast=iCandFirst; iCandLast<iCandFirst+pSolo.cellFilter.eDcr.candMaxN; iCandLast++) { in emptyDrops_CR()
129 …didate cells: minUMI="<< minUMI << "; number of candidate cells=" << iCandLast-iCandFirst+1 <<endl; in emptyDrops_CR()
130 if (iCandLast<iCandFirst) in emptyDrops_CR()
135 vector<double> obsLogProb(iCandLast-iCandFirst+1); in emptyDrops_CR()
138 logFactorial.resize(indCount[iCandFirst].count+1); in emptyDrops_CR()
144 auto icell=indCount[icand+iCandFirst].index; in emptyDrops_CR()
155 auto maxCount=indCount[iCandFirst].count; in emptyDrops_CR()
181 pValues[icand].index=indCount[icand+iCandFirst].index; in emptyDrops_CR()
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