| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/ |
| H A D | unit_test_idmapper.cpp | 63 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(id2); in BOOST_AUTO_TEST_CASE() local
66 mapper.AddMapping(idh1, idh2); in BOOST_AUTO_TEST_CASE()
69 BOOST_CHECK_EQUAL(idh2, mapped_idh); in BOOST_AUTO_TEST_CASE()
92 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(id2); in BOOST_AUTO_TEST_CASE() local
95 mapper.AddMapping(idh1, idh2); in BOOST_AUTO_TEST_CASE()
105 BOOST_CHECK_EQUAL(idh2, mapped_idh); in BOOST_AUTO_TEST_CASE()
121 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(id2); in BOOST_AUTO_TEST_CASE() local
143 BOOST_CHECK_EQUAL(idh2, mapped_idh); in BOOST_AUTO_TEST_CASE()
159 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(id2); in BOOST_AUTO_TEST_CASE() local
195 BOOST_CHECK_EQUAL(idh2, mapped_idh); in BOOST_AUTO_TEST_CASE()
[all …]
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/splign/unit_test/ |
| H A D | unit_test_splign.cpp | 212 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(*subj_id); in BOOST_AUTO_TEST_CASE() local
213 one_seq_annot_hits_in[make_pair(idh1, idh2)].push_back(tr); in BOOST_AUTO_TEST_CASE()
325 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(*subj_id); in BOOST_AUTO_TEST_CASE() local
326 one_seq_annot_hits_in[make_pair(idh1, idh2)].push_back(tr); in BOOST_AUTO_TEST_CASE()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/ |
| H A D | idmapper.cpp | 87 CSeq_id_Handle idh2; in AddMapping() local
92 idh2 = CSeq_id_Handle::GetHandle(*id2); in AddMapping()
98 key = idh2; in AddMapping()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/readers/ |
| H A D | idmapper.cpp | 87 CSeq_id_Handle idh2; in AddMapping() local
92 idh2 = CSeq_id_Handle::GetHandle(*id2); in AddMapping()
98 key = idh2; in AddMapping()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objects/seq/ |
| H A D | seq_id_handle.hpp | 388 NCBI_NS_NCBI::objects::CSeq_id_Handle& idh2) in END_SCOPE()
390 idh1.Swap(idh2); in END_SCOPE()
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objects/seq/ |
| H A D | seq_id_handle.hpp | 388 NCBI_NS_NCBI::objects::CSeq_id_Handle& idh2) in END_SCOPE()
390 idh1.Swap(idh2); in END_SCOPE()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/format/ |
| H A D | dbsource_item.cpp | 210 CSeq_id_Handle idh2 = s_FindBestChoiceForDbsource(*it, scope); in x_GatherInfo() local
211 if (idh2) { in x_GatherInfo()
213 str = x_FormatDBSourceID(idh2); in x_GatherInfo()
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| H A D | context.cpp | 282 CSeq_id_Handle idh2 = sequence::GetIdHandle(*user_loc, &m_Handle.GetScope()); in x_SetLocation() local
283 if ( !sequence::IsSameBioseq(idh1, idh2, &m_Handle.GetScope()) ) { in x_SetLocation()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/format/ |
| H A D | dbsource_item.cpp | 210 CSeq_id_Handle idh2 = s_FindBestChoiceForDbsource(*it, scope); in x_GatherInfo() local
211 if (idh2) { in x_GatherInfo()
213 str = x_FormatDBSourceID(idh2); in x_GatherInfo()
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| H A D | context.cpp | 282 CSeq_id_Handle idh2 = sequence::GetIdHandle(*user_loc, &m_Handle.GetScope()); in x_SetLocation() local
283 if ( !sequence::IsSameBioseq(idh1, idh2, &m_Handle.GetScope()) ) { in x_SetLocation()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/ |
| H A D | seq_loc_util.cpp | 1847 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(*id2); in s_TestForOverlapEx() local
1849 if (idh2 != idh1) { in s_TestForOverlapEx()
1850 syns[idh2] = idh1; in s_TestForOverlapEx()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/util/ |
| H A D | seq_loc_util.cpp | 1847 CSeq_id_Handle idh2 = CSeq_id_Handle::GetHandle(*id2); in s_TestForOverlapEx() local
1849 if (idh2 != idh1) { in s_TestForOverlapEx()
1850 syns[idh2] = idh1; in s_TestForOverlapEx()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/misc/hgvs/ |
| H A D | hgvs_parser2.cpp | 913 CSeq_id_Handle idh2 = GetUniquePrimaryTranscriptId(bsh); in x_header() local
914 if(!idh2) { in x_header()
917 idh = idh2; in x_header()
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| H A D | variation_util2.cpp | 4052 CSeq_id_Handle idh2 = sequence::GetId(idh, *m_scope, sequence::eGetId_Canonical); in x_CacheSeqData() local
4053 SSeqData& d = m_seq_data_map[idh2]; in x_CacheSeqData()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/ |
| H A D | feattable_edit.cpp | 1286 bool idAlpha(const CSeq_id_Handle& idh1, const CSeq_id_Handle idh2) { in idAlpha() argument
1287 return (idh1.AsString() < idh2.AsString()); in idAlpha()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/ |
| H A D | feattable_edit.cpp | 1299 bool idAlpha(const CSeq_id_Handle& idh1, const CSeq_id_Handle idh2) { in idAlpha() argument
1300 return (idh1.AsString() < idh2.AsString()); in idAlpha()
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| /dports/www/proxygen/proxygen-2021.12.27.00/proxygen/lib/http/session/test/ |
| H A D | HQDownstreamSessionTest.cpp | 1047 auto idh2 = checkRequest(req); in TEST_P() local
2704 auto idh2 = checkRequest(); in TEST_P() local
2709 *socketDriver_->streams_[idh2.first].writeBuf.front()); in TEST_P()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/objmgr/demo/ |
| H A D | objmgr_demo.cpp | 1342 CSeq_id_Handle idh2 = CSynonymsSet::GetSeq_id_Handle(it); in Run() local
1343 NcbiCout << " " << idh2.AsString() << NcbiEndl; in Run()
|