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Searched refs:inFile (Results 1 – 25 of 2333) sorted by relevance

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/dports/lang/seed7/seed7/lib/
H A Dscanfile.s7i65 inFile.bufferChar := getc(inFile);
111 inFile.bufferChar := getc(inFile);
135 inFile.bufferChar := getc(inFile);
608 inFile.bufferChar := getc(inFile);
623 inFile.bufferChar := getc(inFile);
638 inFile.bufferChar := getc(inFile);
658 inFile.bufferChar := getc(inFile);
765 inFile.bufferChar := getc(inFile);
827 inFile.bufferChar := getc(inFile);
892 inFile.bufferChar := getc(inFile);
[all …]
H A Dpropertyfile.s7i49 inFile.bufferChar := getc(inFile);
58 when {'\r'}: inFile.bufferChar := getc(inFile);
60 inFile.bufferChar := getc(inFile);
64 when {'\n'}: inFile.bufferChar := getc(inFile);
70 inFile.bufferChar := getc(inFile);
74 inFile.bufferChar := getc(inFile);
92 inFile.bufferChar := getc(inFile);
99 inFile.bufferChar := getc(inFile);
101 inFile.bufferChar := getc(inFile);
104 inFile.bufferChar := getc(inFile);
[all …]
H A Dinifile.s7i56 skipWhiteSpace(inFile);
58 skipWhiteSpace(inFile);
60 inFile.bufferChar := getc(inFile);
64 skipLine(inFile);
73 inFile.bufferChar := getc(inFile);
75 inFile.bufferChar := getc(inFile);
77 while inFile.bufferChar <> ']' and inFile.bufferChar <> '\n' and inFile.bufferChar <> EOF do
79 inFile.bufferChar := getc(inFile);
96 inFile.bufferChar := getc(inFile);
101 skipLine(inFile);
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/mason2/tests/
H A Drun_tests.py83 to_diff=[(ph.inFile('genome.test1.fasta'),
120 '-i', ph.inFile('random.fasta'),
142 args=['-ir', ph.inFile('random.fasta'),
160 to_diff=[(ph.inFile('random_var1.vcf'),
182 args=['-ir', ph.inFile('random.fasta'),
201 to_diff=[(ph.inFile('random_var2.vcf'),
223 args=['-ir', ph.inFile('random.fasta'),
239 to_diff=[(ph.inFile('random_var3.vcf'),
270 to_diff=[(ph.inFile('random_var9.vcf'),
290 args=['-ir', ph.inFile('random.fasta'),
[all …]
/dports/biology/bamutil/bamUtil-1.0.15/libStatGen/bam/test/
H A DBamIndexTest.cpp74 SamFile inFile; in testIndex() local
76 inFile.setSortedValidation(SamFile::COORDINATE); in testIndex()
79 assert(inFile.ReadHeader(samHeader)); in testIndex()
120 assert(inFile.SetReadSection(-1)); in testIndex()
129 assert(inFile.SetReadSection(2)); in testIndex()
136 assert(inFile.SetReadSection(0)); in testIndex()
151 assert(inFile.SetReadSection(1)); in testIndex()
161 assert(inFile.SetReadSection(i)); in testIndex()
170 assert(inFile.GetNumOverlaps(samRecord) == 2); in testIndex()
177 assert(inFile.GetNumOverlaps(samRecord) == 0); in testIndex()
[all …]
/dports/games/aquaria/Aquaria-OSE-v1.002-22-g84366ad/Aquaria/
H A DGameplayVariables.cpp28 if(!inFile) in load()
34 inFile >> s >> maxSwimSpeed; in load()
35 inFile >> s >> maxBurstSpeed; in load()
41 inFile >> s >> zoomStop; in load()
42 inFile >> s >> zoomMove; in load()
43 inFile >> s >> autoSaveTime; in load()
50 inFile >> s >> springTime; in load()
52 inFile >> s >> dodgeTime; in load()
54 inFile >> s >> pushTime; in load()
56 inFile >> s >> zoomNaija; in load()
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/tests/
H A Drun_tests.py67 ph.inFile('adeno-genome.fa'),
82 ph.inFile('adeno-genome.fa'),
98 ph.inFile('adeno-genome.fa'),
114 ph.inFile('adeno-genome.fa'),
130 ph.inFile('adeno-genome.fa'),
146 ph.inFile('adeno-genome.fa'),
166 ph.inFile('adeno-genome.fa'),
182 ph.inFile('adeno-genome.fa'),
199 ph.inFile('adeno-genome.fa'),
216 ph.inFile('adeno-genome.fa'),
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/gustaf/tests/
H A Drun_tests.py202 args=[ph.inFile('adeno.fa'),
226 args=[ph.inFile('adeno.fa'),
233 to_diff=[(ph.inFile('st1_l30.vcf'),
236 (ph.inFile('st1_l30.gff'),
251 args=[ph.inFile('adeno.fa'),
253 '-m', ph.inFile('stellar.gff'),
258 to_diff=[(ph.inFile('st1_l30_m.vcf'),
276 args=[ph.inFile('adeno.fa'),
303 args=[ph.inFile('adeno.fa'),
330 args=[ph.inFile('adeno.fa'),
[all …]
/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/tools/mesh/
H A Duhbd_asc2bin.c20 FILE *inFile = NULL; in main() local
32 inFile = fopen(flnm, "r"); in main()
33 if( inFile == NULL ) in main()
54 fscanf(inFile, "%s", title); in main()
69 fscanf(inFile, "%d", &km); in main()
72 fscanf(inFile, "%d", &one); in main()
75 fscanf(inFile, "%d", &km); in main()
78 fscanf(inFile, "%d", &im); in main()
81 fscanf(inFile, "%d", &jm); in main()
84 fscanf(inFile, "%d", &km); in main()
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/stellar/tests/
H A Drun_tests.py73 to_diff=[(ph.inFile('e-1.stdout'),
76 (ph.inFile('e-1.gff'),
90 to_diff=[(ph.inFile('5e-2.stdout'),
93 (ph.inFile('5e-2.gff'),
107 to_diff=[(ph.inFile('25e-3.stdout'),
110 (ph.inFile('25e-3.gff'),
124 to_diff=[(ph.inFile('75e-3.stdout'),
127 (ph.inFile('75e-3.gff'),
141 to_diff=[(ph.inFile('e-4.stdout'),
144 (ph.inFile('e-4.gff'),
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/bs_tools/tests/
H A Drun_tests.py83 ph.inFile('hg18_chr21_3000.fa'),
84 ph.inFile('reads_se_N6000.fastq')],
99 ph.inFile('hg18_chr21_3000.fa'),
116 ph.inFile('hg18_chr21_3000.fa'),
131 ph.inFile('hg18_chr21_3000.fa'),
146 ph.inFile('hg18_chr21_3000.fa'),
165 ph.inFile('hg18_chr21_3000.fa'),
185 ph.inFile('hg18_chr21_3000.fa'),
187 to_diff=[(ph.inFile('snps_se_0.vcf'),
200 ph.inFile('hg18_chr21_3000.fa'),
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers3/tests/
H A Drun_tests.py95 ph.inFile('adeno-genome.fa'),
110 ph.inFile('adeno-genome.fa'),
126 ph.inFile('adeno-genome.fa'),
142 ph.inFile('adeno-genome.fa'),
162 ph.inFile('adeno-genome.fa'),
180 ph.inFile('adeno-genome.fa'),
200 ph.inFile('adeno-genome.fa'),
216 ph.inFile('adeno-genome.fa'),
234 ph.inFile('adeno-genome.fa'),
252 ph.inFile('adeno-genome.fa'),
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/insegt/tests/
H A Drun_tests.py60 ph.inFile('alignments.sam'),
61 ph.inFile('annotations.gff')],
62 to_diff=[(ph.inFile('default_annoOutput.gff'),
76 ph.inFile('alignments.sam'),
77 ph.inFile('annotations.gff')],
92 ph.inFile('alignments.sam'),
93 ph.inFile('annotations.gff')],
108 ph.inFile('alignments.sam'),
109 ph.inFile('annotations.gff')],
124 ph.inFile('alignments.sam'),
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/pair_align/tests/
H A Drun_tests.py58 args=['-s', ph.inFile('%s.fa' % fname),
60 to_diff=[(ph.inFile('%s_out.fa' % fname),
62 (ph.inFile('%s.stdout' % fname),
71 '-s', ph.inFile('%s.fa' % fname),
101 '-s', ph.inFile('%s.fa' % fname),
112 '-s', ph.inFile('%s.fa' % fname),
123 '-s', ph.inFile('%s.fa' % fname),
134 '-s', ph.inFile('%s.fa' % fname),
147 args=['-ma', ph.inFile('VTML200I'),
148 '-s', ph.inFile('%s.fa' % fname),
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/snp_store/tests/
H A Drun_tests.py70 args=[ph.inFile('human-chr22-inf2.fa'),
71 ph.inFile('human-reads2.gff'),
76 (ph.inFile('snps_default.vcf'),
87 args=[ph.inFile('human-chr22-inf2.fa'),
88 ph.inFile('human-reads2.sam'),
94 (ph.inFile('snps_realign.vcf'),
105 args=[ph.inFile('human-chr22-inf2.fa'),
106 ph.inFile('human-reads2.sam'),
123 args=[ph.inFile('human-chr22-inf2.fa'),
124 ph.inFile('human-reads2.gff'),
[all …]
/dports/audio/audacity/audacity-Audacity-3.1.3/lib-src/soundtouch/source/SoundStretch/
H A Dmain.cpp86 *inFile = new WavInFile(stdin); in openFiles()
95 bits = (int)(*inFile)->getNumBits(); in openFiles()
127 channels = (int)inFile->getNumChannels(); in setup()
191 while (inFile->eof() == 0) in process()
234 BPMDetect bpm(inFile->getNumChannels(), inFile->getSampleRate()); in detectBPM()
246 while (inFile->eof() == 0) in detectBPM()
263 inFile->rewind(); in detectBPM()
287 WavInFile *inFile; in main() local
306 detectBPM(inFile, params); in main()
310 setup(&soundTouch, inFile, params); in main()
[all …]
/dports/audio/soundtouch/soundtouch-2.3.1/source/SoundStretch/
H A Dmain.cpp79 *inFile = new WavInFile(stdin); in openFiles()
88 bits = (int)(*inFile)->getNumBits(); in openFiles()
119 channels = (int)inFile->getNumChannels(); in setup()
182 while (inFile->eof() == 0) in process()
224 BPMDetect bpm(inFile->getNumChannels(), inFile->getSampleRate()); in detectBPM()
236 while (inFile->eof() == 0) in detectBPM()
253 inFile->rewind(); in detectBPM()
276 WavInFile *inFile; in main() local
295 detectBPM(inFile, params); in main()
299 setup(&soundTouch, inFile, params); in main()
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/seqan_tcoffee/tests/
H A Drun_tests.py63 args=['-s', ph.inFile('%s.fa' % fname),
65 to_diff=[(ph.inFile('%s.fasta' % fname),
74 '-s', ph.inFile('%s.fa' % fname),
99 '-s', ph.inFile('%s.fa' % fname),
110 '-s', ph.inFile('%s.fa' % fname),
122 '-s', ph.inFile('%s.fa' % fname),
132 '-s', ph.inFile('%s.fa' % fname),
145 '-s', ph.inFile('%s.fa' % fname),
153 '-s', ph.inFile('%s.fa' % fname),
161 '-s', ph.inFile('%s.fa' % fname),
[all …]
/dports/devel/fossology-nomos-standalone/fossology-3.11.0/src/testing/functional/
H A DFossologyFunctionalTests.php95 $report = genHtml($inFile, $outFile, $xslFile);
105 $upFail = check4failures($inFile);
108 echo "There were errors in $inFile\n";
140 $report = genHtml($inFile, $outFile, $xslFile);
150 $urFail = check4failures($inFile);
153 echo "There were errors in the $inFile\n";
176 $fileString = file_get_contents($inFile,FALSE ,NULL, 1);
178 $bytes = file_put_contents($inFile, $fileString);
184 $report = genHtml($inFile, $outFile, $xslFile);
194 $verFail = check4failures($inFile);
[all …]
/dports/deskutils/lumina-mediaplayer/lumina-1.6.0/src-qt5/core/lumina-open/
H A Dmain.cpp151 if(inFile.endsWith("/")){ inFile.chop(1); } in cmdFromUser()
174 QString inFile, ActionID; in getCMD() local
253 …if(inFile.startsWith("file://")){ inFile = QUrl(inFile).toLocalFile(); } //change from URL to file… in getCMD()
259 …else if(QFile::exists(QDir::currentPath()+"/"+inFile)){isFile=true; inFile = QDir::currentPath()+"… in getCMD()
261 else if(QUrl(inFile).isValid() && !inFile.startsWith("/") ){ isUrl=true; } in getCMD()
266 QFileInfo info(inFile); in getCMD()
281 XDGDesktop DF(inFile); in getCMD()
300 inFile = DF.url; in getCMD()
313 inFile = DF.path; in getCMD()
344 inFile.replace("%20"," "); in getCMD()
[all …]
/dports/deskutils/lumina-fileinfo/lumina-1.6.0/src-qt5/core/lumina-open/
H A Dmain.cpp151 if(inFile.endsWith("/")){ inFile.chop(1); } in cmdFromUser()
174 QString inFile, ActionID; in getCMD() local
253 …if(inFile.startsWith("file://")){ inFile = QUrl(inFile).toLocalFile(); } //change from URL to file… in getCMD()
259 …else if(QFile::exists(QDir::currentPath()+"/"+inFile)){isFile=true; inFile = QDir::currentPath()+"… in getCMD()
261 else if(QUrl(inFile).isValid() && !inFile.startsWith("/") ){ isUrl=true; } in getCMD()
266 QFileInfo info(inFile); in getCMD()
281 XDGDesktop DF(inFile); in getCMD()
300 inFile = DF.url; in getCMD()
313 inFile = DF.path; in getCMD()
344 inFile.replace("%20"," "); in getCMD()
[all …]
/dports/deskutils/lumina-fm/lumina-1.6.0/src-qt5/core/lumina-open/
H A Dmain.cpp151 if(inFile.endsWith("/")){ inFile.chop(1); } in cmdFromUser()
174 QString inFile, ActionID; in getCMD() local
253 …if(inFile.startsWith("file://")){ inFile = QUrl(inFile).toLocalFile(); } //change from URL to file… in getCMD()
259 …else if(QFile::exists(QDir::currentPath()+"/"+inFile)){isFile=true; inFile = QDir::currentPath()+"… in getCMD()
261 else if(QUrl(inFile).isValid() && !inFile.startsWith("/") ){ isUrl=true; } in getCMD()
266 QFileInfo info(inFile); in getCMD()
281 XDGDesktop DF(inFile); in getCMD()
300 inFile = DF.url; in getCMD()
313 inFile = DF.path; in getCMD()
344 inFile.replace("%20"," "); in getCMD()
[all …]
/dports/deskutils/lumina-archiver/lumina-1.6.0/src-qt5/core/lumina-open/
H A Dmain.cpp151 if(inFile.endsWith("/")){ inFile.chop(1); } in cmdFromUser()
174 QString inFile, ActionID; in getCMD() local
253 …if(inFile.startsWith("file://")){ inFile = QUrl(inFile).toLocalFile(); } //change from URL to file… in getCMD()
259 …else if(QFile::exists(QDir::currentPath()+"/"+inFile)){isFile=true; inFile = QDir::currentPath()+"… in getCMD()
261 else if(QUrl(inFile).isValid() && !inFile.startsWith("/") ){ isUrl=true; } in getCMD()
266 QFileInfo info(inFile); in getCMD()
281 XDGDesktop DF(inFile); in getCMD()
300 inFile = DF.url; in getCMD()
313 inFile = DF.path; in getCMD()
344 inFile.replace("%20"," "); in getCMD()
[all …]
/dports/deskutils/lumina-textedit/lumina-1.6.0/src-qt5/core/lumina-open/
H A Dmain.cpp151 if(inFile.endsWith("/")){ inFile.chop(1); } in cmdFromUser()
174 QString inFile, ActionID; in getCMD() local
253 …if(inFile.startsWith("file://")){ inFile = QUrl(inFile).toLocalFile(); } //change from URL to file… in getCMD()
259 …else if(QFile::exists(QDir::currentPath()+"/"+inFile)){isFile=true; inFile = QDir::currentPath()+"… in getCMD()
261 else if(QUrl(inFile).isValid() && !inFile.startsWith("/") ){ isUrl=true; } in getCMD()
266 QFileInfo info(inFile); in getCMD()
281 XDGDesktop DF(inFile); in getCMD()
300 inFile = DF.url; in getCMD()
313 inFile = DF.path; in getCMD()
344 inFile.replace("%20"," "); in getCMD()
[all …]
/dports/deskutils/lumina-photo/lumina-1.6.0/src-qt5/core/lumina-open/
H A Dmain.cpp151 if(inFile.endsWith("/")){ inFile.chop(1); } in cmdFromUser()
174 QString inFile, ActionID; in getCMD() local
253 …if(inFile.startsWith("file://")){ inFile = QUrl(inFile).toLocalFile(); } //change from URL to file… in getCMD()
259 …else if(QFile::exists(QDir::currentPath()+"/"+inFile)){isFile=true; inFile = QDir::currentPath()+"… in getCMD()
261 else if(QUrl(inFile).isValid() && !inFile.startsWith("/") ){ isUrl=true; } in getCMD()
266 QFileInfo info(inFile); in getCMD()
281 XDGDesktop DF(inFile); in getCMD()
300 inFile = DF.url; in getCMD()
313 inFile = DF.path; in getCMD()
344 inFile.replace("%20"," "); in getCMD()
[all …]

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