Searched refs:indel_context_t (Results 1 – 4 of 4) sorted by relevance
184 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in anti_support_thread_run()271 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in anti_supporting_read_scan()458 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in remove_neighbour()630 indel_context_t * indel_context = (indel_context_t*)malloc(sizeof(indel_context_t)); in init_indel_tables()703 …indel_context_t * indel_context = (indel_context_t *) global_context -> module_contexts[MODULE_IND… in init_indel_thread_contexts()855 …indel_context_t * indel_context = (indel_context_t*)global_context -> module_contexts[MODULE_INDEL… in sort_junction_entry_table()1021 …indel_context_t * indel_context = (indel_context_t*)global_context -> module_contexts[MODULE_INDEL… in finalise_indel_and_junction_thread()1172 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in add_annotation_to_junctions()2244 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in write_indel_final_results()2477 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in build_local_reassembly()[all …]
140 …event_table = ((indel_context_t *)global_context -> module_contexts[MODULE_INDEL_ID]) -> event_ent… in search_events_to_front()141 …event_space = ((indel_context_t *)global_context -> module_contexts[MODULE_INDEL_ID]) -> event_spa… in search_events_to_front()598 …event_table = ((indel_context_t *)global_context -> module_contexts[MODULE_INDEL_ID]) -> event_ent… in search_events_to_back()1766 …event_no = ((indel_context_t *)global_context -> module_contexts[MODULE_INDEL_ID]) -> total_event… in simple_add_junction()4002 …event_no = ((indel_context_t *)global_context -> module_contexts[MODULE_INDEL_ID]) -> total_event… in find_new_junctions()4130 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in write_fusion_final_results()4277 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in write_junction_final_results()5708 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in find_translocation_brk_PQR()5799 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in get_event_two_coordinates()6279 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE… in finalise_inversions()[all …]
148 } indel_context_t; typedef
1541 …event_table = ((indel_context_t *)global_context -> module_contexts[MODULE_INDEL_ID]) -> event_ent…1542 …event_space = ((indel_context_t *)global_context -> module_contexts[MODULE_INDEL_ID]) -> event_spa…2403 …indel_context_t * indel_context = (indel_context_t *)global_context -> module_contexts[MODULE_INDE…3506 indel_context_t * indel_context = (indel_context_t *)context -> module_contexts[MODULE_INDEL_ID];