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/dports/biology/subread/subread-2.0.2-source/src/
H A Dcore-indel.c3298 …indels_after_perfect_segments, short * indels_read_positions, float * indel_quality, unsigned int … in full_indel_alignment() argument
3425 indel_quality[ret] = pow(2,-is_unreliable); in full_indel_alignment()
3447 indel_quality[xk1] *= pow(2.,-(ret * (1+total_unmatched))); in full_indel_alignment()
3624 …_context_t * global_context, unsigned int best_pos, int indels, float indel_quality, char * insert… in put_long_indel_event() argument
3664 found -> event_quality = max(found ->event_quality, indel_quality); in put_long_indel_event()
3682 new_event -> event_quality = indel_quality; in put_long_indel_event()