Searched refs:indels_read_positions (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/subread/subread-2.0.2-source/src/ |
| H A D | core-indel.c | 3298 …fect_segment_lengths,int * indels_after_perfect_segments, short * indels_read_positions, float * i… in full_indel_alignment() argument
3427 indels_read_positions[ret] = used_probe_in_rebuilt_window[xk1] + perfect_segment_lengths[ret]; in full_indel_alignment()
4081 short indels_read_positions[MAX_INDELS_IN_WINDOW]; in finalise_pileup_file_by_voting() local
4085 …tart_pos, perfect_segment_lengths, indels_after_perfect_segments, indels_read_positions, quality_o… in finalise_pileup_file_by_voting()
4106 …sprintf(contig_CIGAR+strlen(contig_CIGAR), "%dM%d%c", indels_read_positions[xk2] - read_position_c… in finalise_pileup_file_by_voting()
4107 read_position_cursor = indels_read_positions[xk2]; in finalise_pileup_file_by_voting()
4136 …, best_pos, indels, quality_of_this_indel, full_rebuilt_window + indels_read_positions[xk2], CHRO… in finalise_pileup_file_by_voting()
|