| /dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/sqlite_dbi/assembly/ |
| H A D | RTreeAssemblyAdapter.cpp | 44 indexTable = readsTable + "_RTree"; in RTreeAssemblyAdapter()
62 SQLiteWriteQuery(q2.arg(indexTable), db, os).execute(); in createReadsTables()
77 …ring qStr = QString("SELECT COUNT(*) FROM %1 AS i WHERE " + RANGE_CONDITION_CHECK).arg(indexTable); in countReads()
92 … return SQLiteReadQuery(QString("SELECT MAX(gend) FROM %1").arg(indexTable), db, os).selectInt64(); in getMaxEndPos()
98 .arg(indexTable); in getReads()
113 .arg(indexTable); in getReadsByRow()
136 SQLiteWriteQuery insertIQ(q2.arg(indexTable), db, os); in addReads()
179 …SQLiteQuery cq("SELECT gstart, gend FROM " + indexTable + " WHERE id = " + QString::number(dbId), … in addReads()
192 SQLiteUtils::remove(indexTable, "id", readId, 1, db, os); in removeReads()
205 RTreePackAlgorithmAdapter packAdapter(db, readsTable, indexTable); in pack()
[all …]
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| H A D | RTreeAssemblyAdapter.h | 58 QString indexTable; variable
64 : db(_db), readsTable(_readsTable), indexTable(_indexTable), updateQuery(nullptr) { in RTreePackAlgorithmAdapter()
74 QString indexTable; variable
|
| /dports/biology/mmseqs2/MMseqs2-13-45111/src/prefiltering/ |
| H A D | IndexBuilder.cpp | 53 void IndexBuilder::fillDatabase(IndexTable *indexTable, SequenceLookup **maskedLookup, in fillDatabase() argument
103 Indexer idxer(static_cast<unsigned int>(indexTable->getAlphabetSize()), seq->getKmerSize()); in fillDatabase()
108 … generator = new KmerGenerator(seq->getKmerSize(), indexTable->getAlphabetSize(), kmerThr); in fillDatabase()
130 totalKmerCount += indexTable->addSimilarKmerCount(&s, generator); in fillDatabase()
207 indexTable->initMemory(info->tableSize); in fillDatabase()
208 indexTable->init(); in fillDatabase()
221 Indexer idxer(static_cast<unsigned int>(indexTable->getAlphabetSize()), seq->getKmerSize()); in fillDatabase()
238 indexTable->addSimilarSequence(&s, generator, &buffer, bufferSize, &idxer); in fillDatabase()
241 indexTable->addSequence(&s, &idxer, &buffer, bufferSize, kmerThr, idScoreLookup); in fillDatabase()
254 indexTable->revertPointer(); in fillDatabase()
[all …]
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| H A D | PrefilteringIndexReader.cpp | 205 IndexTable indexTable(adjustAlphabetSize, kmerSize, false); in createIndexFile() local
207 IndexBuilder::fillDatabase(&indexTable, in createIndexFile()
211 indexTable.printStatistics(subMat->num2aa); in createIndexFile()
221 char *entries = (char *) indexTable.getEntries(); in createIndexFile()
222 size_t entriesSize = indexTable.getTableEntriesNum() * indexTable.getSizeOfEntry(); in createIndexFile()
228 char *offsets = (char*)indexTable.getOffsets(); in createIndexFile()
229 size_t offsetsSize = (indexTable.getTableSize() + 1) * sizeof(size_t); in createIndexFile()
232 indexTable.deleteEntries(); in createIndexFile()
253 uint64_t entriesNum = indexTable.getTableEntriesNum(); in createIndexFile()
260 size_t tablesize = indexTable.getSize(); in createIndexFile()
|
| /dports/security/aws-iam-authenticator/aws-iam-authenticator-0.5.2/vendor/gonum.org/v1/gonum/graph/topo/ |
| H A D | tarjan.go | 118 indexTable: make(map[int64]int, len(nodes)),
123 if t.indexTable[v.ID()] == 0 {
139 indexTable map[int64]int member
155 t.indexTable[vID] = t.index
163 if t.indexTable[wID] == 0 {
169 t.lowLink[vID] = min(t.lowLink[vID], t.indexTable[wID])
174 if t.lowLink[vID] == t.indexTable[vID] {
|
| /dports/www/grafana8/grafana-8.3.6/vendor/gonum.org/v1/gonum/graph/topo/ |
| H A D | tarjan.go | 118 indexTable: make(map[int64]int, len(nodes)),
123 if t.indexTable[v.ID()] == 0 {
139 indexTable map[int64]int member
155 t.indexTable[vID] = t.index
163 if t.indexTable[wID] == 0 {
169 t.lowLink[vID] = min(t.lowLink[vID], t.indexTable[wID])
174 if t.lowLink[vID] == t.indexTable[vID] {
|
| /dports/sysutils/istio/istio-1.6.7/vendor/github.com/openshift/api/vendor/gonum.org/v1/gonum/graph/topo/ |
| H A D | tarjan.go | 118 indexTable: make(map[int64]int, len(nodes)),
123 if t.indexTable[v.ID()] == 0 {
139 indexTable map[int64]int member
155 t.indexTable[vID] = t.index
163 if t.indexTable[wID] == 0 {
169 t.lowLink[vID] = min(t.lowLink[vID], t.indexTable[wID])
174 if t.lowLink[vID] == t.indexTable[vID] {
|
| /dports/lang/ghc/ghc-8.10.7/rts/ |
| H A D | Profiling.c | 552 IndexTable *ixtable = ccs->indexTable; in pushCostCentre()
562 if (ccs->indexTable != ixtable) in pushCostCentre()
591 ccs->indexTable = addToIndexTable (ccs->indexTable, in pushCostCentre()
637 new_ccs->indexTable = EMPTY_TABLE; in actualPush_()
655 ccs->indexTable = addToIndexTable(ccs->indexTable, new_ccs, cc, in actualPush_()
802 for (i = ccs->indexTable; i != 0; i = i->next) { in aggregateCCCosts()
819 prev = &ccs->indexTable; in pruneCCSTree()
834 || ( ccs->indexTable != 0 ) in pruneCCSTree()
879 if (ccs->indexTable == NULL) return; in sortCCSTree()
885 IndexTable *sortedList = ccs->indexTable; in sortCCSTree()
[all …]
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| /dports/graphics/lightzone/LightZone-4.1.8-3-g36e87773/lightcrafts/jnisrc/EDISON/segm/ |
| H A D | rlist.cpp | 85 if(!(indexTable = new int [L])) in RegionList()
117 delete [] indexTable; in ~RegionList()
173 indexTable[freeBlockLoc+i] = indeces[i]; in AddRegion()
286 return &indexTable[regionList[regionNum].region]; in GetRegionIndeces()
|
| /dports/lang/squeak/Squeak-4.10.2.2614-src/unix/src/vm/intplugins/ADPCMCodecPlugin/ |
| H A D | ADPCMCodecPlugin.c | 129 short int *indexTable; in primitiveDecodeMono() local
150 indexTable = fetchArrayofObject(15, rcvr); in primitiveDecodeMono()
151 indexTable -= 1; in primitiveDecodeMono()
239 index += indexTable[(delta & deltaValueMask) + 1]; in primitiveDecodeMono()
310 short int *indexTable; in primitiveDecodeStereo() local
335 indexTable = fetchArrayofObject(15, rcvr); in primitiveDecodeStereo()
336 indexTable -= 1; in primitiveDecodeStereo()
580 short int *indexTable; in primitiveEncodeMono() local
600 indexTable = fetchArrayofObject(15, rcvr); in primitiveEncodeMono()
601 indexTable -= 1; in primitiveEncodeMono()
[all …]
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| /dports/games/openbor4432/openbor-ba1eb4f/engine/source/adpcmlib/ |
| H A D | adpcm.c | 14 static int indexTable[16] = variable
155 state.index[0] += indexTable[delta]; in adpcm_encode_mono()
226 index += indexTable[delta]; in adpcm_decode_mono()
383 state.index[0] += indexTable[delta]; in adpcm_encode_stereo()
465 state.index[1] += indexTable[delta]; in adpcm_encode_stereo()
517 index[0] += indexTable[delta]; in adpcm_decode_stereo()
580 index[1] += indexTable[delta]; in adpcm_decode_stereo()
|
| /dports/games/openbor/openbor-3caaddd5/tools/openwav2bor/source/ |
| H A D | adpcm.c | 14 static int indexTable[16] = { variable
132 state.index[0] += indexTable[delta]; in adpcm_encode_mono()
185 index += indexTable[delta]; in adpcm_decode_mono()
296 state.index[0] += indexTable[delta]; in adpcm_encode_stereo()
358 state.index[1] += indexTable[delta]; in adpcm_encode_stereo()
399 index[0] += indexTable[delta]; in adpcm_decode_stereo()
435 index[1] += indexTable[delta]; in adpcm_decode_stereo()
|
| /dports/games/openbor3482/openbor-2c1ecd7/engine/source/adpcmlib/ |
| H A D | adpcm.c | 14 static int indexTable[16] = { variable
132 state.index[0] += indexTable[delta]; in adpcm_encode_mono()
185 index += indexTable[delta]; in adpcm_decode_mono()
296 state.index[0] += indexTable[delta]; in adpcm_encode_stereo()
358 state.index[1] += indexTable[delta]; in adpcm_encode_stereo()
399 index[0] += indexTable[delta]; in adpcm_decode_stereo()
435 index[1] += indexTable[delta]; in adpcm_decode_stereo()
|
| /dports/games/openbor3979/openbor-2bcf25b/engine/source/adpcmlib/ |
| H A D | adpcm.c | 14 static int indexTable[16] = variable
155 state.index[0] += indexTable[delta]; in adpcm_encode_mono()
226 index += indexTable[delta]; in adpcm_decode_mono()
383 state.index[0] += indexTable[delta]; in adpcm_encode_stereo()
465 state.index[1] += indexTable[delta]; in adpcm_encode_stereo()
517 index[0] += indexTable[delta]; in adpcm_decode_stereo()
580 index[1] += indexTable[delta]; in adpcm_decode_stereo()
|
| /dports/games/openbor/openbor-3caaddd5/tools/borplay/source/ |
| H A D | adpcm.c | 14 static int indexTable[16] = { variable
132 state.index[0] += indexTable[delta]; in adpcm_encode_mono()
185 index += indexTable[delta]; in adpcm_decode_mono()
296 state.index[0] += indexTable[delta]; in adpcm_encode_stereo()
358 state.index[1] += indexTable[delta]; in adpcm_encode_stereo()
399 index[0] += indexTable[delta]; in adpcm_decode_stereo()
435 index[1] += indexTable[delta]; in adpcm_decode_stereo()
|
| /dports/games/openbor3711/openbor-6ec17fa/engine/source/adpcmlib/ |
| H A D | adpcm.c | 14 static int indexTable[16] = { variable
132 state.index[0] += indexTable[delta]; in adpcm_encode_mono()
185 index += indexTable[delta]; in adpcm_decode_mono()
296 state.index[0] += indexTable[delta]; in adpcm_encode_stereo()
358 state.index[1] += indexTable[delta]; in adpcm_encode_stereo()
399 index[0] += indexTable[delta]; in adpcm_decode_stereo()
435 index[1] += indexTable[delta]; in adpcm_decode_stereo()
|
| /dports/games/openbor/openbor-3caaddd5/engine/source/adpcmlib/ |
| H A D | adpcm.c | 14 static int indexTable[16] = variable
155 state.index[0] += indexTable[delta]; in adpcm_encode_mono()
226 index += indexTable[delta]; in adpcm_decode_mono()
383 state.index[0] += indexTable[delta]; in adpcm_encode_stereo()
465 state.index[1] += indexTable[delta]; in adpcm_encode_stereo()
517 index[0] += indexTable[delta]; in adpcm_decode_stereo()
580 index[1] += indexTable[delta]; in adpcm_decode_stereo()
|
| /dports/games/libretro-scummvm/scummvm-7b1e929/engines/scumm/imuse_digi/ |
| H A D | dimuse_bndmgr.cpp | 39 _budleDirCache[fileId].indexTable = NULL; in BundleDirCache()
46 free(_budleDirCache[fileId].indexTable); in ~BundleDirCache()
59 return _budleDirCache[slot].indexTable; in getIndexTable()
105 _budleDirCache[freeSlot].indexTable = in matchFile()
107 assert(_budleDirCache[freeSlot].indexTable); in matchFile()
130 strcpy(_budleDirCache[freeSlot].indexTable[i].filename, in matchFile()
132 _budleDirCache[freeSlot].indexTable[i].index = i; in matchFile()
134 qsort(_budleDirCache[freeSlot].indexTable, _budleDirCache[freeSlot].numFiles, in matchFile()
|
| /dports/games/scummvm/scummvm-2.5.1/engines/scumm/imuse_digi/ |
| H A D | dimuse_bndmgr.cpp | 39 _budleDirCache[fileId].indexTable = NULL; in BundleDirCache()
46 free(_budleDirCache[fileId].indexTable); in ~BundleDirCache()
59 return _budleDirCache[slot].indexTable; in getIndexTable()
105 _budleDirCache[freeSlot].indexTable = in matchFile()
107 assert(_budleDirCache[freeSlot].indexTable); in matchFile()
130 strcpy(_budleDirCache[freeSlot].indexTable[i].filename, in matchFile()
132 _budleDirCache[freeSlot].indexTable[i].index = i; in matchFile()
134 qsort(_budleDirCache[freeSlot].indexTable, _budleDirCache[freeSlot].numFiles, in matchFile()
|
| /dports/multimedia/opentoonz/opentoonz-1.5.0/toonz/sources/common/tvrender/ |
| H A D | tpaletteutil.cpp | 7 std::map<int, int> &indexTable, in mergePalette() argument
13 indexTable[0] = 0; in mergePalette()
47 assert(indexTable.count(srcStyleId) == 0); in mergePalette()
48 indexTable[srcStyleId] = tarStyleId; in mergePalette()
|
| /dports/devel/kf5-kcoreaddons/kcoreaddons-5.89.0/src/lib/caching/ |
| H A D | kshareddatacache.cpp | 480 IndexTableEntry *indices = indexTable(); in clearInternalTables()
491 const IndexTableEntry *indexTable() const in indexTable() function
500 const IndexTableEntry *base = indexTable(); in pageTable()
533 IndexTableEntry *indexTable() in indexTable() function
536 return const_cast<IndexTableEntry *>(that->indexTable()); in indexTable()
694 indexTable()[affectedIndex].firstPage = freeSpot; in defragment()
756 if (indexTable()[position].fileNameHash == keyHash) { in findNamedEntry()
757 pageID firstPage = indexTable()[position].firstPage; in findNamedEntry()
1308 IndexTableEntry *entriesIndex = indexTable(); in removeEntry()
1413 IndexTableEntry *indices = d->shm->indexTable(); in insert()
[all …]
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| /dports/audio/xwave/xwave2-981109/adpcm2pcm/ |
| H A D | adpcm.c | 55 static int indexTable[16] = { variable
153 index += indexTable[delta];
214 index += indexTable[delta];
|
| /dports/devel/libphonenumber/libphonenumber-8.12.39/metadata/src/main/java/com/google/i18n/phonenumbers/metadata/table/ |
| H A D | RangeTable.java | 699 RangeTable indexTable = makeIndexTable(rows); in simplifyIndexTable() local
703 indexTable.getPrefixMap(INDEX, minPrefixLength); in simplifyIndexTable()
706 RangeTree allRanges = indexTable.getAllRanges(); in simplifyIndexTable()
708 for (int n : indexTable.getAssignedValues(INDEX)) { in simplifyIndexTable()
709 RangeTree otherRanges = allRanges.subtract(indexTable.getRanges(INDEX, n)); in simplifyIndexTable()
745 RangeTable prefixDisjointTable = indexTable in simplifyIndexTable()
783 for (int n : indexTable.getAssignedValues(INDEX)) { in simplifyIndexTable()
793 Builder indexTable = RangeTable.builder(INDEX_SCHEMA); in makeIndexTable() local
798 indexTable.add(rows.get(i).getRanges()); in makeIndexTable()
800 indexTable.assign(INDEX, i, rows.get(i).getRanges(), OverwriteMode.NEVER); in makeIndexTable()
[all …]
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| /dports/games/libretro-play/Play--3cd0a367b5e24c061a6310c68c9fa7f6b531ebd4/deps/Framework/src/mpeg2/ |
| H A D | DctCoefficientTable.cpp | 7 …unsigned int maxBits, VLCTABLEENTRY* tableEntry, unsigned int entryCount, unsigned int* indexTable) in CDctCoefficientTable() argument
8 : CVLCTable(maxBits, tableEntry, entryCount, indexTable) in CDctCoefficientTable()
|
| /dports/comms/mgetty+sendfax/mgetty-1.1.37/voice/libpvf/ |
| H A D | multitech.c | 68 static int indexTable[16] = { variable
166 index += indexTable[delta];
227 index += indexTable[delta];
|