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Searched refs:isInsideRead (Results 1 – 2 of 2) sorted by relevance

/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/utils/clipping/
H A DReadClipper.java358 …if (adaptorBoundary == ReadUtils.CANNOT_COMPUTE_ADAPTOR_BOUNDARY || !ReadUtils.isInsideRead(read, … in hardClipAdaptorSequence()
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/utils/read/
H A DReadUtils.java742 public static boolean isInsideRead(final GATKRead read, final int referenceCoordinate) { in isInsideRead() method in ReadUtils