Searched refs:is_SAM_file (Results 1 – 1 of 1) sorted by relevance
227 int is_SAM_file; member6748 global_context -> is_SAM_file = is_SAM; in fc_thread_init_global_context()7037 …, global_context -> max_BAM_header_size/1024/1024+2, !global_context-> is_SAM_file, !( global_cont… in fc_thread_start_threads()8563 …ation(&global_context, argv[1], file_name_ptr, argv[3], global_context.is_SAM_file, isGTF, & n_inp… in readSummary()9005 global_context->is_SAM_file = 1; in readSummary_single_file()9006 if(file_probe == 1) global_context->is_SAM_file = 0; in readSummary_single_file()