/dports/biology/spoa/spoa-4.0.7/src/ |
H A D | main.cpp | 124 const std::vector<bool>& is_reversed, in PrintGfa() argument 130 if (!is_reversed.empty() && is_reversed.size() < graph.sequences().size()) { in PrintGfa() 178 bool ir = !is_reversed.empty() && is_reversed[i]; in PrintGfa() 276 std::vector<bool> is_reversed; in main() local 299 is_reversed.push_back(false); in main() 302 is_reversed.push_back(true); in main() 343 PrintGfa(graph, headers, is_reversed, it == 4); in main()
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/dports/biology/subread/subread-2.0.2-source/src/longread-one/ |
H A D | LRMsorted-hashtable.h | 31 …hash_t * the_table, LRMgehash_key_t key, int offset, int read_len, int is_reversed, LRMgene_vote_t… 32 …hash_t * the_table, LRMgehash_key_t key, int offset, int read_len, int is_reversed, LRMgene_vote_t… 44 …hash_t * the_table, LRMgehash_key_t key, int offset, int read_len, int is_reversed, LRMgene_vote_t…
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H A D | LRMsorted-hashtable.c | 53 …_t * the_table, LRMgehash_key_t raw_key, int offset, int read_len, int is_reversed, LRMgene_vote_t… in LRMgehash_go_q() argument 131 if(is_reversed == (0!=(vote -> masks[offsetX][i]&LRMIS_NEGATIVE_STRAND))) in LRMgehash_go_q() 177 vote -> masks[offsetX2][datalen2]=(is_reversed?LRMIS_NEGATIVE_STRAND:0); in LRMgehash_go_q() 441 …_t * the_table, LRMgehash_key_t raw_key, int offset, int read_len, int is_reversed, LRMgene_vote_t… in LRMgehash_go_QQ() argument 492 …if( kv == di && is_reversed == (0!=(vote -> masks[offsetX][i]&LRMIS_NEGATIVE_STRAND)) && offset … in LRMgehash_go_QQ() 507 vote -> masks[offsetX][datalen]=(is_reversed?LRMIS_NEGATIVE_STRAND:0); in LRMgehash_go_QQ() 518 …hash_t * the_table, LRMgehash_key_t key, int offset, int read_len, int is_reversed, LRMgene_vote_t… in LRMgehash_go_tolerance() argument 522 …ret+=LRMgehash_go_q(the_table, key, offset, read_len, is_reversed, vote, indel_tolerance, subread_… in LRMgehash_go_tolerance() 558 …int dret=LRMgehash_go_q(the_table, mutation_key, offset, read_len, is_reversed, vote, indel_toler… in LRMgehash_go_tolerance()
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H A D | longread-mapping.c | 517 …for(iteration_context->is_reversed = 0; iteration_context->is_reversed<2; iteration_context->is_re… 519 …if(0 == iteration_context->is_reversed) LRMreverse_read_and_qual(context, thread_context, iteratio… 521 iteration_context->is_reversed=1; 666 int ii, max_window_no = LRMMAX_SORTED_WINDOW_NO_HARD_LIMIT, is_reversed; local 677 for(is_reversed = 0; is_reversed < 2; is_reversed++){ 685 if( iteration_context -> sorting_is_negative_strand[ii] != is_reversed ) 694 …while(iteration_context -> sorting_is_negative_strand[win_start_ii] != is_reversed) win_start_ii +… 700 while(iteration_context -> sorting_is_negative_strand[win_start_ii] != is_reversed){ 720 if( is_reversed == iteration_context -> sorted_window_is_negative_strand[tt] && 1075 …if(iteration_context -> is_reversed != iteration_context -> sorted_window_is_negative_strand[windo… [all …]
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/dports/biology/subread/subread-2.0.2-source/src/ |
H A D | sorted-hashtable.h | 61 …(gehash_t * the_table, gehash_key_t key, int offset, int read_len, int is_reversed, gene_vote_t * … 63 …(gehash_t * the_table, gehash_key_t key, int offset, int read_len, int is_reversed, gene_vote_t * … 65 …(gehash_t * the_table, gehash_key_t key, int offset, int read_len, int is_reversed, gene_vote_t * … 66 …(gehash_t * the_table, gehash_key_t key, int offset, int read_len, int is_reversed, gene_vote_t * …
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/dports/editors/helix/helix-0.5.0/cargo-crates/ropey-1.3.1/src/ |
H A D | iter.rs | 88 is_reversed: bool, field 106 is_reversed: false, in new() 192 self.is_reversed = !self.is_reversed; in reverse() 200 if !self.is_reversed { in prev() 295 is_reversed: bool, field 403 self.is_reversed = !self.is_reversed; in reverse() 519 is_reversed: bool, field 615 self.is_reversed = !self.is_reversed; in reverse() 811 is_reversed, in size_hint() 871 is_reversed: bool, field [all …]
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/dports/editors/kak-lsp/kak-lsp-11.1.0/cargo-crates/ropey-1.3.1/src/ |
H A D | iter.rs | 88 is_reversed: bool, field 106 is_reversed: false, in new() 192 self.is_reversed = !self.is_reversed; in reverse() 200 if !self.is_reversed { in prev() 295 is_reversed: bool, field 403 self.is_reversed = !self.is_reversed; in reverse() 519 is_reversed: bool, field 615 self.is_reversed = !self.is_reversed; in reverse() 811 is_reversed, in size_hint() 871 is_reversed: bool, field [all …]
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/dports/biology/infernal/infernal-1.1.3/src/impl_sse/ |
H A D | sse_cmsearch.c | 92 int do_reverse, is_reversed; in main() local 317 is_reversed = 0; in main() 327 fprintf(stderr,"Stage 1: %-24s %-22s",seq->name,is_reversed?"(reverse complement)":""); in main() 354 if (!is_reversed) in main() 362 if (!is_reversed) in main() 381 if (!is_reversed) in main() 387 if (!is_reversed) in main() 410 if (!is_reversed) in main() 418 if (!is_reversed) in main() 431 if (do_reverse && !is_reversed) { in main() [all …]
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/dports/sysutils/gnome-control-center/gnome-control-center-41.2/panels/keyboard/ |
H A D | keyboard-shortcuts.c | 68 gboolean is_reversed, hidden; in parse_start_tag() local 153 is_reversed = FALSE; in parse_start_tag() 178 is_reversed = TRUE; in parse_start_tag() 207 key.is_reversed = is_reversed; in parse_start_tag()
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H A D | cc-keyboard-item.c | 38 gboolean is_reversed; member 608 gboolean is_reversed) in cc_keyboard_item_add_reverse_item() argument 616 reverse_item->is_reversed = !is_reversed; in cc_keyboard_item_add_reverse_item() 619 g_warn_if_fail (reverse_item->is_reversed == !!is_reversed); in cc_keyboard_item_add_reverse_item() 621 item->is_reversed = !!is_reversed; in cc_keyboard_item_add_reverse_item()
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/dports/x11/mlterm/mlterm-3.9.1/uitoolkit/ |
H A D | ui_color_manager.c | 192 if (color_man->is_reversed) { in ui_get_xcolor() 275 if (color_man->is_reversed) { in ui_color_manager_reverse_video() 279 color_man->is_reversed = 1; in ui_color_manager_reverse_video() 285 if (!color_man->is_reversed) { in ui_color_manager_restore_video() 289 color_man->is_reversed = 0; in ui_color_manager_restore_video()
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H A D | ui_selection.c | 212 sel->is_reversed = 1; in ui_start_selection() 307 if (!sel->is_reversed) { in ui_restore_selected_region_color_except_logs() 332 if (!sel->is_reversed) { in ui_reverse_selected_region_color_except_logs() 354 if (!sel->is_reversed) { in ui_restore_selected_region_color() 366 sel->is_reversed = 0; in ui_restore_selected_region_color() 376 if (sel->is_reversed) { 388 sel->is_reversed = 1;
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H A D | ui_selection.h | 52 int8_t is_reversed; member 85 #define ui_sel_is_reversed(sel) ((sel)->is_reversed)
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/dports/biology/wise/wise2.4.1/src/dynlibsrc/ |
H A D | hscore.xs | 299 set_is_reversed(obj,is_reversed) 301 boolean is_reversed 303 RETVAL = Wise2_replace_is_reversed_DataEntry(obj,is_reversed); 310 is_reversed(obj)
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H A D | hscore.pod | 405 =item is_reversed 495 &Wise2::DataEntry::set_is_reversed(obj,is_reversed) 497 Replace member variable is_reversed 503 Argument is_reversed [OWNER] New value of the variable [boolean] 504 Return [SOFT ] member variable is_reversed [boolean] 507 =item is_reversed 509 &Wise2::DataEntry::is_reversed(obj) 511 Access member variable is_reversed 517 Return [SOFT ] member variable is_reversed [boolean]
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/dports/www/firefox-esr/firefox-91.8.0/gfx/skia/skia/src/pdf/ |
H A D | SkClusterator.cpp | 14 static bool is_reversed(const uint32_t* clusters, uint32_t count) { in is_reversed() function 33 , fReversedChars(fClusters ? is_reversed(fClusters, fGlyphCount) : false) in SkClusterator()
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/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/skia/src/pdf/ |
H A D | SkClusterator.cpp | 14 static bool is_reversed(const uint32_t* clusters, uint32_t count) { in is_reversed() function 33 , fReversedChars(fClusters ? is_reversed(fClusters, fGlyphCount) : false) in SkClusterator()
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/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/skia/src/pdf/ |
H A D | SkClusterator.cpp | 14 static bool is_reversed(const uint32_t* clusters, uint32_t count) { in is_reversed() function 33 , fReversedChars(fClusters ? is_reversed(fClusters, fGlyphCount) : false) in SkClusterator()
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/dports/www/firefox/firefox-99.0/gfx/skia/skia/src/pdf/ |
H A D | SkClusterator.cpp | 14 static bool is_reversed(const uint32_t* clusters, uint32_t count) { in is_reversed() function 33 , fReversedChars(fClusters ? is_reversed(fClusters, fGlyphCount) : false) in SkClusterator()
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/dports/mail/thunderbird/thunderbird-91.8.0/gfx/skia/skia/src/pdf/ |
H A D | SkClusterator.cpp | 14 static bool is_reversed(const uint32_t* clusters, uint32_t count) { in is_reversed() function 33 , fReversedChars(fClusters ? is_reversed(fClusters, fGlyphCount) : false) in SkClusterator()
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/dports/lang/spidermonkey78/firefox-78.9.0/gfx/skia/skia/src/pdf/ |
H A D | SkClusterator.cpp | 14 static bool is_reversed(const uint32_t* clusters, uint32_t count) { in is_reversed() function 33 , fReversedChars(fClusters ? is_reversed(fClusters, fGlyphCount) : false) in SkClusterator()
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/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/blink/renderer/core/html/ |
H A D | list_item_ordinal.h | 96 static NodeAndOrdinal NextOrdinalItem(bool is_reversed, 104 static void InvalidateOrdinalsAfter(bool is_reversed,
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/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/blink/renderer/core/html/ |
H A D | list_item_ordinal.h | 74 static NodeAndOrdinal NextOrdinalItem(bool is_reversed, 82 static void InvalidateOrdinalsAfter(bool is_reversed,
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/dports/biology/wise/wise2.4.1/src/models/ |
H A D | alignwise.c | 17 int is_reversed; in show_Gene_debug() local 22 is_reversed = 1; in show_Gene_debug() 24 is_reversed = 0; in show_Gene_debug() 28 if( is_reversed == 0 ) { in show_Gene_debug()
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/dports/math/p5-Math-String/Math-String-1.30/t/ |
H A D | sequence.t | 47 ok ($seq->is_reversed(),0); 50 ok ($seq->is_reversed(),1);
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