Searched refs:junctionthr (Results 1 – 2 of 2) sorted by relevance
148 int junctionthr=1; // number of reads needed to support a particular junction variable1002 if (!s.is_empty()) junctionthr=s.asInt(); in processOptions()
29 extern int junctionthr; // number of reads needed to support a particular junction10734 if (jd.nreads_good<junctionthr) { in good_junc()11414 …if(junction[i]->nreads_good<1.25*junctionthr) { // threshold for bad junctions is higher; (should … in build_graphs()11480 if(ejunction[i]->nreads_good<1.25*junctionthr) { // threshold for bad junctions is higher in build_graphs()13532 …)>longintron || (!longreads && rd.juncs[i-1]->nreads-rd.juncs[i-1]->nm<junctionthr && !rd.juncs[i-… in count_good_junctions()