/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/api/ |
H A D | queryinfo_unit_test.cpp | 63 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 64 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 65 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 88 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 89 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 90 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 112 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 113 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 114 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 136 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local [all …]
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H A D | scoreblk_unit_test.cpp | 75 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 76 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 77 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 120 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 121 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 122 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 173 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 174 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 175 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 248 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local [all …]
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H A D | blastoptions_unit_test.cpp | 347 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 348 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 516 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 517 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 604 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 605 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 875 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 876 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 877 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 952 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local [all …]
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H A D | blastextend_unit_test.cpp | 271 const CBlastOptions& kOpts = opts_handle.GetOptions(); in BOOST_FIXTURE_TEST_SUITE() local 272 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_FIXTURE_TEST_SUITE() 273 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_FIXTURE_TEST_SUITE() 358 const CBlastOptions& kOpts = opts_handle.GetOptions(); in BOOST_AUTO_TEST_CASE() local 359 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 360 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 471 const CBlastOptions& kOpts = opts_handle.GetOptions(); in BOOST_AUTO_TEST_CASE() local 472 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 473 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE()
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H A D | traceback_unit_test.cpp | 224 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 225 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 359 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 360 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 492 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 493 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 619 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 620 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 862 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 863 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() [all …]
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H A D | blastsetup_unit_test.cpp | 886 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 887 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 888 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 1206 const CBlastOptions& kOpts = opts_handle->GetOptions(); in BOOST_AUTO_TEST_CASE() local 1213 kOpts.GetProgramType(), in BOOST_AUTO_TEST_CASE() 1334 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 1335 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 1336 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 1373 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 1374 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() [all …]
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H A D | rmblast_traceback_unit_test.cpp | 214 const CBlastOptions& kOpts = blaster.GetOptionsHandle().GetOptions(); in BOOST_FIXTURE_TEST_SUITE() local 215 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_FIXTURE_TEST_SUITE() 216 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_FIXTURE_TEST_SUITE()
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H A D | optionshandle_unit_test.cpp | 265 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 266 BOOST_REQUIRE_EQUAL(eAaLookupTable, kOpts.GetLookupTableType()); in BOOST_AUTO_TEST_CASE() 268 BOOST_REQUIRE_EQUAL(eCompressedAaLookupTable, kOpts.GetLookupTableType()); in BOOST_AUTO_TEST_CASE() 270 BOOST_REQUIRE_EQUAL(eAaLookupTable, kOpts.GetLookupTableType()); in BOOST_AUTO_TEST_CASE()
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H A D | redoalignment_unit_test.cpp | 244 const CBlastOptions& kOpts = blaster.GetOptionsHandle().GetOptions(); in runRedoAlignmentCoreUnitTest() local 245 EBlastProgramType core_prog = kOpts.GetProgramType(); in runRedoAlignmentCoreUnitTest() 246 ENa_strand strand_opt = kOpts.GetStrandOption(); in runRedoAlignmentCoreUnitTest()
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H A D | blastfilter_unit_test.cpp | 449 const CBlastOptions& kOpts, in setupQueryStructures() argument 455 EBlastProgramType prog = kOpts.GetProgramType(); in setupQueryStructures() 456 ENa_strand strand_opt = kOpts.GetStrandOption(); in setupQueryStructures() 1579 const CBlastOptions& kOpts = opts->GetOptions(); in setupQueryInfoForOffsetTranslation() local 1580 EBlastProgramType prog = kOpts.GetProgramType(); in setupQueryInfoForOffsetTranslation() 1581 ENa_strand strand_opt = kOpts.GetStrandOption(); in setupQueryInfoForOffsetTranslation()
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H A D | split_query_unit_test.cpp | 214 const CBlastOptions& kOpts = opts->GetOptions(); in x_PrepareBlastQueryStructures() local 215 EBlastProgramType prog = kOpts.GetProgramType(); in x_PrepareBlastQueryStructures() 217 ? *strand : kOpts.GetStrandOption(); in x_PrepareBlastQueryStructures()
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/api/ |
H A D | queryinfo_unit_test.cpp | 63 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 64 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 65 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 88 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 89 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 90 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 112 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 113 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 114 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 136 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local [all …]
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H A D | scoreblk_unit_test.cpp | 75 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 76 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 77 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 120 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 121 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 122 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 173 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 174 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 175 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 248 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local [all …]
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H A D | blastoptions_unit_test.cpp | 347 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 348 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 516 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 517 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 604 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 605 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 875 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 876 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 877 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 952 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local [all …]
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H A D | blastextend_unit_test.cpp | 271 const CBlastOptions& kOpts = opts_handle.GetOptions(); in BOOST_FIXTURE_TEST_SUITE() local 272 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_FIXTURE_TEST_SUITE() 273 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_FIXTURE_TEST_SUITE() 358 const CBlastOptions& kOpts = opts_handle.GetOptions(); in BOOST_AUTO_TEST_CASE() local 359 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 360 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 471 const CBlastOptions& kOpts = opts_handle.GetOptions(); in BOOST_AUTO_TEST_CASE() local 472 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 473 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE()
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H A D | traceback_unit_test.cpp | 224 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 225 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 359 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 360 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 492 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 493 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 619 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 620 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 862 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 863 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() [all …]
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H A D | blastsetup_unit_test.cpp | 886 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 887 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 888 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 1206 const CBlastOptions& kOpts = opts_handle->GetOptions(); in BOOST_AUTO_TEST_CASE() local 1213 kOpts.GetProgramType(), in BOOST_AUTO_TEST_CASE() 1334 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 1335 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() 1336 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_AUTO_TEST_CASE() 1373 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 1374 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_AUTO_TEST_CASE() [all …]
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H A D | rmblast_traceback_unit_test.cpp | 214 const CBlastOptions& kOpts = blaster.GetOptionsHandle().GetOptions(); in BOOST_FIXTURE_TEST_SUITE() local 215 EBlastProgramType prog = kOpts.GetProgramType(); in BOOST_FIXTURE_TEST_SUITE() 216 ENa_strand strand_opt = kOpts.GetStrandOption(); in BOOST_FIXTURE_TEST_SUITE()
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H A D | optionshandle_unit_test.cpp | 265 const CBlastOptions& kOpts = opts->GetOptions(); in BOOST_AUTO_TEST_CASE() local 266 BOOST_REQUIRE_EQUAL(eAaLookupTable, kOpts.GetLookupTableType()); in BOOST_AUTO_TEST_CASE() 268 BOOST_REQUIRE_EQUAL(eCompressedAaLookupTable, kOpts.GetLookupTableType()); in BOOST_AUTO_TEST_CASE() 270 BOOST_REQUIRE_EQUAL(eAaLookupTable, kOpts.GetLookupTableType()); in BOOST_AUTO_TEST_CASE()
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H A D | redoalignment_unit_test.cpp | 244 const CBlastOptions& kOpts = blaster.GetOptionsHandle().GetOptions(); in runRedoAlignmentCoreUnitTest() local 245 EBlastProgramType core_prog = kOpts.GetProgramType(); in runRedoAlignmentCoreUnitTest() 246 ENa_strand strand_opt = kOpts.GetStrandOption(); in runRedoAlignmentCoreUnitTest()
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H A D | blastfilter_unit_test.cpp | 449 const CBlastOptions& kOpts, in setupQueryStructures() argument 455 EBlastProgramType prog = kOpts.GetProgramType(); in setupQueryStructures() 456 ENa_strand strand_opt = kOpts.GetStrandOption(); in setupQueryStructures() 1579 const CBlastOptions& kOpts = opts->GetOptions(); in setupQueryInfoForOffsetTranslation() local 1580 EBlastProgramType prog = kOpts.GetProgramType(); in setupQueryInfoForOffsetTranslation() 1581 ENa_strand strand_opt = kOpts.GetStrandOption(); in setupQueryInfoForOffsetTranslation()
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H A D | split_query_unit_test.cpp | 214 const CBlastOptions& kOpts = opts->GetOptions(); in x_PrepareBlastQueryStructures() local 215 EBlastProgramType prog = kOpts.GetProgramType(); in x_PrepareBlastQueryStructures() 217 ? *strand : kOpts.GetStrandOption(); in x_PrepareBlastQueryStructures()
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/dports/sysutils/kubectl/kubernetes-1.22.2/vendor/sigs.k8s.io/kustomize/kustomize/v4/commands/build/ |
H A D | build.go | 131 func HonorKustomizeFlags(kOpts *krusty.Options) *krusty.Options { 132 kOpts.DoLegacyResourceSort = getFlagReorderOutput() == legacy 133 kOpts.LoadRestrictions = getFlagLoadRestrictorValue() 137 kOpts.PluginConfig = c 139 kOpts.PluginConfig.HelmConfig.Enabled = theFlags.enable.helm 141 kOpts.PluginConfig.HelmConfig.Command = theFlags.helmCommand 142 kOpts.AddManagedbyLabel = isManagedByLabelEnabled() 143 return kOpts
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/dports/lang/kturtle/kturtle-21.12.3/src/ |
H A D | editor.cpp | 295 long kOpts = fdialog->options(); in find() local 297 if (kOpts & KFind::CaseSensitive) { qOpts |= QTextDocument::FindCaseSensitively; } in find() 298 if (kOpts & KFind::FindBackwards) { qOpts |= QTextDocument::FindBackward; } in find() 299 if (kOpts & KFind::WholeWordsOnly) { qOpts |= QTextDocument::FindWholeWords; } in find() 307 long kOpts = fdialog->options(); in findNext() local 309 if (kOpts & KFind::CaseSensitive) { qOpts |= QTextDocument::FindCaseSensitively; } in findNext() 310 if (kOpts & KFind::FindBackwards) { qOpts |= QTextDocument::FindBackward; } in findNext() 311 if (kOpts & KFind::WholeWordsOnly) { qOpts |= QTextDocument::FindWholeWords; } in findNext() 319 long kOpts = fdialog->options(); in findPrev() local 323 if (!(kOpts & KFind::FindBackwards)) { qOpts |= QTextDocument::FindBackward; } in findPrev() [all …]
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/dports/sysutils/kubectl/kubernetes-1.22.2/staging/src/k8s.io/cli-runtime/pkg/resource/ |
H A D | kustomizevisitor.go | 40 kOpts := krusty.MakeDefaultOptions() 41 kOpts.DoLegacyResourceSort = true 42 k := krusty.MakeKustomizer(kOpts)
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