Searched refs:kmerOccurenceIndex (Results 1 – 3 of 3) sorted by relevance
48 IDnum kmerOccurenceIndex; member137 table->kmerOccurenceIndex = 0; in allocateKmerOccurences()148 table->kmerOccurenceIndex++; in recordKmerOccurence()161 IDnum kmerOccurenceIndex; in sortKmerOccurenceTable() local177 for (kmerOccurenceIndex = 0; in sortKmerOccurenceTable()179 kmerOccurenceIndex++) { in sortKmerOccurenceTable()182 [kmerOccurenceIndex]. in sortKmerOccurenceTable()187 *accelPtr = kmerOccurenceIndex; in sortKmerOccurenceTable()203 for (kmerOccurenceIndex = 1; in sortKmerOccurenceTable()204 kmerOccurenceIndex < table->kmerTableSize; in sortKmerOccurenceTable()[all …]
148 Coordinate kmerOccurenceIndex; in referenceGraphKmers() local208 kmerOccurenceIndex = 0; in referenceGraphKmers()292 kmerOccurenceIndex++; in referenceGraphKmers()309 for (kmerOccurenceIndex = 0; in referenceGraphKmers()310 kmerOccurenceIndex < kmerCount; in referenceGraphKmers()311 kmerOccurenceIndex++) { in referenceGraphKmers()314 [kmerOccurenceIndex]. in referenceGraphKmers()319 *accelPtr = kmerOccurenceIndex; in referenceGraphKmers()