| /dports/biology/bwa/bwa-0.7.17/ |
| H A D | kstring.h | 11 #ifndef kroundup32
12 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
27 kroundup32(s->m); in ks_resize()
36 kroundup32(s->m); in kputsn()
54 kroundup32(s->m); in kputc()
71 kroundup32(s->m); in kputw()
88 kroundup32(s->m); in kputuw()
105 kroundup32(s->m); in kputl()
|
| H A D | kseq.h | 90 #ifndef kroundup32
91 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
124 kroundup32(str->m); \
200 kroundup32(seq->seq.m); /* rounded to the next closest 2^k */ \
|
| /dports/www/h2o-devel/h2o-dcc7134/deps/klib/ |
| H A D | kstring.h | 35 #ifndef kroundup32
36 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
95 kroundup32(s->m); in ks_resize()
119 kroundup32(s->m); in kputsn()
141 kroundup32(s->m); in kputc()
157 kroundup32(s->m); in kputc_()
172 kroundup32(s->m); in kputsn_()
194 kroundup32(s->m); in kputw()
215 kroundup32(s->m); in kputuw()
237 kroundup32(s->m); in kputl()
|
| H A D | kbit.h | 22 #ifndef kroundup32 // round a 32-bit integer to the next closet integer; from "bit twiddling hacks"
23 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
|
| H A D | knhx.c | 94 #ifndef kroundup32
95 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
102 kroundup32(s->m); in kputsn()
114 kroundup32(s->m); in kputc()
|
| H A D | kseq.h | 86 #ifndef kroundup32
87 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
120 kroundup32(str->m); \
196 kroundup32(seq->seq.m); /* rounded to the next closest 2^k */ \
|
| /dports/biology/py-deeptoolsintervals/deeptoolsintervals-0.1.9/deeptoolsintervals/tree/ |
| H A D | kstring.h | 35 #ifndef kroundup32
36 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
101 kroundup32(s->m); in ks_resize()
137 kroundup32(s->m); in kputsn()
159 kroundup32(s->m); in kputc()
175 kroundup32(s->m); in kputc_()
190 kroundup32(s->m); in kputsn_()
212 kroundup32(s->m); in kputw()
233 kroundup32(s->m); in kputuw()
255 kroundup32(s->m); in kputl()
|
| /dports/biology/ugene/ugene-40.1/src/libs_3rdparty/samtools/src/samtools/ |
| H A D | kstring.h | 8 #ifndef kroundup32
9 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
50 kroundup32(s->m); in kputsn()
68 kroundup32(s->m); in kputc()
85 kroundup32(s->m); in kputw()
102 kroundup32(s->m); in kputuw()
|
| H A D | kseq.h | 89 #ifndef kroundup32
90 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
121 kroundup32(str->m); \
197 kroundup32(seq->seq.m); /* rounded to the next closest 2^k */ \
|
| /dports/biology/stringtie/stringtie-2.1.1/samtools-0.1.18/ |
| H A D | kstring.h | 8 #ifndef kroundup32
9 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
50 kroundup32(s->m); in kputsn()
68 kroundup32(s->m); in kputc()
85 kroundup32(s->m); in kputw()
102 kroundup32(s->m); in kputuw()
|
| /dports/biology/seqan1/seqan-1.3.1/lib/samtools/ |
| H A D | kstring.h | 8 #ifndef kroundup32
9 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
49 kroundup32(s->m); in kputsn()
67 kroundup32(s->m); in kputc()
84 kroundup32(s->m); in kputw()
101 kroundup32(s->m); in kputuw()
|
| H A D | kseq.h | 92 #ifndef kroundup32
93 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
124 kroundup32(str->m); \
191 kroundup32(seq->seq.m); /* rounded to next closest 2^k */ \
|
| /dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/ |
| H A D | kroundup.h | 69 #ifndef kroundup32
70 #define kroundup32(x) kroundup64(x) macro
|
| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/ |
| H A D | kroundup.h | 69 #ifndef kroundup32
70 #define kroundup32(x) kroundup64(x) macro
|
| /dports/biology/htslib/htslib-1.14/htslib/ |
| H A D | kroundup.h | 69 #ifndef kroundup32
70 #define kroundup32(x) kroundup64(x) macro
|
| /dports/biology/bcftools/bcftools-1.14/ |
| H A D | kheap.h | 81 #ifndef kroundup32
82 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
134 kroundup32(heap->mdat); \
|
| /dports/biology/bio-mocha/bcftools-1.14/ |
| H A D | kheap.h | 81 #ifndef kroundup32
82 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
134 kroundup32(heap->mdat); \
|
| /dports/biology/py-pysam/pysam-0.18.0/bcftools/ |
| H A D | kheap.h | 81 #ifndef kroundup32
82 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
134 kroundup32(heap->mdat); \
|
| /dports/biology/velvet/velvet_1.2.10/src/ |
| H A D | kseq.h | 88 #ifndef kroundup32
89 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
120 kroundup32(str->m); \
187 kroundup32(seq->seq.m); /* rounded to next closest 2^k */ \
|
| /dports/biology/velvet/velvet_1.2.10/contrib/shuffleSequences_fasta/ |
| H A D | kseq.h | 88 #ifndef kroundup32
89 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
120 kroundup32(str->m); \
187 kroundup32(seq->seq.m); /* rounded to next closest 2^k */ \
|
| /dports/biology/fastool/Fastool-0.1.4/ |
| H A D | kseq.h | 88 #ifndef kroundup32
89 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
120 kroundup32(str->m); \
187 kroundup32(seq->seq.m); /* rounded to next closest 2^k */ \
|
| /dports/biology/py-pywgsim/pywgsim-0.5.2/pywgsim/src/ |
| H A D | kseq.h | 90 #ifndef kroundup32
91 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
122 kroundup32(str->m); \
189 kroundup32(seq->seq.m); /* rounded to next closest 2^k */ \
|
| /dports/biology/plink/plink-ng-79b2df8c/1.9/ |
| H A D | hts.h | 47 #ifndef kroundup32
48 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
59 (m) = (n); kroundup32(m); \
63 int t = (m); (m) = (n); kroundup32(m); \
|
| /dports/biology/bioawk/bioawk-1.0-7-gfd40150/ |
| H A D | kseq.h | 87 #ifndef kroundup32
88 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
122 kroundup32(str->m); \
196 kroundup32(seq->seq.m); /* rounded to the next closest 2^k */ \
|
| /dports/biology/freebayes/freebayes-1.3.5/contrib/SeqLib/bwa/ |
| H A D | kseq.h | 90 #ifndef kroundup32
91 #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(… macro
124 kroundup32(str->m); \
200 kroundup32(seq->seq.m); /* rounded to the next closest 2^k */ \
|