Searched refs:ksw_global2 (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/bwa/bwa-0.7.17/ |
| H A D | ksw.h | 84 …int ksw_global2(int qlen, const uint8_t *query, int tlen, const uint8_t *target, int m, const int8…
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| H A D | ksw.c | 506 int ksw_global2(int qlen, const uint8_t *query, int tlen, const uint8_t *target, int m, const int8_… in ksw_global2() function
612 return ksw_global2(qlen, query, tlen, target, m, mat, gapo, gape, gapo, gape, w, n_cigar_, cigar_); in ksw_global()
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| H A D | bwa.c | 167 …*score = ksw_global2(l_query, query, rlen, rseq, 5, mat, o_del, e_del, o_ins, e_ins, w, n_cigar, &… in bwa_gen_cigar2()
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