| /dports/biology/bowtie/bowtie-1.3.1/scripts/ |
| H A D | pe_verify.pl | 132 my @l1s = split(/[\t]/, $l1);
134 $#l1s >= 5 || die "Paired-end alignment not formatted correctly: $l1";
137 my @l1rs = split(/\//, $l1s[0]);
139 $#l1rs >= 1 || die "Read not formatted correctly: $l1s[0]";
145 my $loff = int($l1s[3]);
148 $insLen > length($l1s[4]) || die "Insert length did not exceed first mate length";
149 $insLen > length($l1s[5]) || die "Insert length did not exceed first mate length";
152 my $read1Short = $l1s[4];
153 my $qual1Short = $l1s[5];
157 $read1Mms = $l1s[7] if defined($l1s[7]);
[all …]
|
| /dports/textproc/linuxdoc-tools/linuxdoc-tools-0.9.82/entity-map/ |
| H A D | entity-map.spec | 34 /usr/share/entity-map/@VERSION@/GFextra.2l1s
43 /usr/share/entity-map/@VERSION@/ISOdia.2l1s
53 /usr/share/entity-map/@VERSION@/ISOlat1.2l1s
62 /usr/share/entity-map/@VERSION@/ISOlat2.2l1s
71 /usr/share/entity-map/@VERSION@/ISOnum.2l1s
81 /usr/share/entity-map/@VERSION@/ISOpub.2l1s
91 /usr/share/entity-map/@VERSION@/ISOtech.2l1s
|
| H A D | MANIFEST | 42 sdata/ISOnum.2l1s
52 sdata/ISOpub.2l1s
62 sdata/ISOtech.2l1s
|
| /dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/MolDraw2D/ |
| H A D | MolDraw2D.cpp | 224 l1s = at1_cds + perp; in calcDoubleBondLines()
232 l1s = at1_cds + perp; in calcDoubleBondLines()
237 l1s = at1_cds; in calcDoubleBondLines()
3132 d2d.drawLine(l1s, l1f); in drawQueryBond1()
3141 d2d.drawLine(l1s, l1f); in drawQueryBond1()
3153 d2d.drawLine(l1s, l1f); in drawQueryBond1()
3164 d2d.drawLine(l1s, l1f); in drawQueryBond1()
3178 d2d.drawLine(l1s, l1f); in drawQueryBond1()
3869 l1s = getDrawCoords(l1s); in doesNoteClashNbourBonds()
4450 s = (-s1_y * (l1s.x - l2s.x) + s1_x * (l1s.y - l2s.y)) / d; in doLinesIntersect()
[all …]
|
| /dports/textproc/linuxdoc-tools/linuxdoc-tools-0.9.82/entity-map/sdata/ |
| H A D | Makefile.in | 12 L1SFILES = ISOnum.2l1s ISOpub.2l1s ISOtech.2l1s
|
| /dports/math/maxima/maxima-5.43.2/share/tensor/ |
| H A D | ex_calc.mac | 27 [i,l1,l2,l11,l22,l1s,lk1,div,rp],
86 l1s:map("=",l1,l11), l2s:map("=",l2,l22),
88 any:sublis(l1s,any), body:sublis(l2s,body),
153 [l11,l1s,lk1,lk2,indd,res,
161 l1s:map("=",l1,l11),
165 res:sublis(l1s,forma),
171 l1s:map("=",[l1[i]],[indd]),
173 'ifb([l1[i],ind1],[indd])*sublis(l1s,forma)
|
| /dports/devel/gdb761/gdb-7.6.1/sim/testsuite/sim/bfin/ |
| H A D | se_loop_nest_ppm_1.S | 349 LSETUP ( l1s , l1e ) LC0 = P0;
350 LSETUP ( l1s , l1e ) LC1 = P1;
351 l1s:R5 += 1;
|
| /dports/devel/stack/stack-2.7.3/_cabal_deps/basement-0.0.12/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/net-im/matterhorn/matterhorn-50200.13.0/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/finance/hs-hledger-web/hledger-web-1.19/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/devel/hs-hoogle/hoogle-5.0.18.2/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/devel/hs-spago/spago-0.20.3/_cabal_deps/basement-0.0.12/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/devel/hs-darcs/darcs-2.16.4/_cabal_deps/basement-0.0.12/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/devel/hs-hpack/hpack-0.34.4/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/lang/elm/compiler-0.19.1/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/www/hs-wai-app-static/wai-app-static-3.1.7.2/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/www/hs-yesod-bin/yesod-bin-1.6.1/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/www/hs-postgrest/postgrest-8.0.0/_cabal_deps/basement-0.0.12/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/devel/hs-git-annex/git-annex-8.20210903/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/lang/purescript/purescript-0.14.5/_cabal_deps/basement-0.0.12/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/textproc/hs-pandoc-crossref/pandoc-crossref-0.3.12.0/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/x11/hs-xmobar/xmobar-0.39/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/textproc/hs-pandoc/pandoc-2.14.2/_cabal_deps/basement-0.0.12/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/www/hs-DAV/DAV-1.3.4/_cabal_deps/basement-0.0.11/Basement/Sized/ |
| H A D | List.hs | 326 where loop (l1:l1s) (l2:l2s) (l3:l3s) = (l1,l2,l3) : loop l1s l2s l3s
333 where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) = (l1,l2,l3,l4) : loop l1s l2s l3s l4s
340 …where loop (l1:l1s) (l2:l2s) (l3:l3s) (l4:l4s) (l5:l5s) = (l1,l2,l3,l4,l5) : loop l1s l2s l3s l4s …
|
| /dports/lang/rexx-regutil/regutil/ |
| H A D | regunicode.c | 134 static int utol1(unsigned char * l1s, const unsigned short * us, int ul) in utol1() argument
138 l1s[i] = (unsigned char)us[i]; in utol1()
144 static int l1tou(unsigned short * us, const unsigned char * l1s, int ul) in l1tou() argument
149 us[i] = l1s[i]; in l1tou()
|