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Searched refs:lastverticalw (Results 1 – 11 of 11) sorted by relevance

/dports/biology/mafft/mafft-7.267-without-extensions/core/
H A DGalign11.c46 fprintf( stderr, "lastverticalw[%d] = %f\n", i, lastverticalw[i] ); in Atracking()
64 wm = lastverticalw[0]; in Atracking()
67 if( lastverticalw[i] >= wm ) in Atracking()
69 wm = lastverticalw[i]; in Atracking()
233 if( lastverticalw ) FreeFloatVec( lastverticalw ); lastverticalw = NULL; in G__align11()
333 FreeFloatVec( lastverticalw ); in G__align11()
359 lastverticalw = AllocateFloatVec( ll1+2 ); in G__align11()
711 static TLS double *lastverticalw; /* kufuu sureba iranai */ in G__align11_noalign() local
727 FreeFloatVec( lastverticalw ); in G__align11_noalign()
765 FreeFloatVec( lastverticalw ); in G__align11_noalign()
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H A DSAalignmm.c49 static double Atracking( double *lasthorizontalw, double *lastverticalw, in Atracking() argument
66 fprintf( stderr, "lastverticalw[%d] = %f\n", i, lastverticalw[i] ); in Atracking()
74 wm = lastverticalw[0]; in Atracking()
77 if( lastverticalw[i] >= wm ) in Atracking()
79 wm = lastverticalw[i]; in Atracking()
176 static TLS double *lastverticalw; /* kufuu sureba iranai */ in Aalign() local
209 FreeFloatVec( lastverticalw ); in Aalign()
233 lastverticalw = AllocateFloatVec( ll1+2 ); in Aalign()
302 lastverticalw[0] = currentw[lgth2-1]; in Aalign()
352 lastverticalw[i] = currentw[lgth2-1]; in Aalign()
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H A DLalign11.c231 static TLS double *lastverticalw; /* kufuu sureba iranai */ in L__align11() local
279 FreeFloatVec( lastverticalw ); in L__align11()
334 FreeFloatVec( lastverticalw ); in L__align11()
359 lastverticalw = AllocateFloatVec( ll1+2 ); in L__align11()
436 lastverticalw[0] = currentw[lgth2-1]; in L__align11()
681 lastverticalw[i] = currentw[lgth2-1]; in L__align11()
801 FreeFloatVec( lastverticalw ); in L__align11_noalign()
834 FreeFloatVec( lastverticalw ); in L__align11_noalign()
860 lastverticalw = AllocateFloatVec( ll1+2 ); in L__align11_noalign()
939 lastverticalw[0] = currentw[lgth2-1]; in L__align11_noalign()
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H A Dgenalign11.c30 static double gentracking( double *lasthorizontalw, double *lastverticalw, in gentracking() argument
47 fprintf( stderr, "lastverticalw[%d] = %f\n", i, lastverticalw[i] ); in gentracking()
140 static TLS double *lastverticalw; /* kufuu sureba iranai */ in genL__align11() local
176 FreeFloatVec( lastverticalw ); in genL__align11()
220 FreeFloatVec( lastverticalw ); in genL__align11()
249 lastverticalw = AllocateFloatVec( ll1+2 ); in genL__align11()
332 lastverticalw[0] = currentw[lgth2-1]; in genL__align11()
565 lastverticalw[i] = currentw[lgth2-1]; in genL__align11()
584 …gentracking( currentw, lastverticalw, seq1, seq2, mseq1, mseq2, cpmx1, cpmx2, ijpi, ijpj, off1pt, … in genL__align11()
H A DMSalign11.c47 static double Atracking( double *lasthorizontalw, double *lastverticalw, in Atracking() argument
64 fprintf( stderr, "lastverticalw[%d] = %f\n", i, lastverticalw[i] ); in Atracking()
314 static double *lastverticalw; /* kufuu sureba iranai */ in MSalign11() local
345 FreeFloatVec( lastverticalw ); in MSalign11()
374 lastverticalw = AllocateFloatVec( ll1+2 ); in MSalign11()
468 lastverticalw[0] = currentw[lgth2-1]; in MSalign11()
562 lastverticalw[i] = currentw[lgth2-1]; in MSalign11()
568 g = lastverticalw[i]; in MSalign11()
643 Atracking( currentw, lastverticalw, seq1, seq2, mseq1, mseq2, cpmx1, cpmx2, ijp ); in MSalign11()
H A DpartSalignmm.c694 wm = lastverticalw[0]; in Atracking_localhom()
697 if( lastverticalw[i] >= wm ) in Atracking_localhom()
699 wm = lastverticalw[i]; in Atracking_localhom()
840 wm = lastverticalw[0]; in Atracking()
843 if( lastverticalw[i] >= wm ) in Atracking()
845 wm = lastverticalw[i]; in Atracking()
1042 FreeFloatVec( lastverticalw ); in partA__align()
1160 FreeFloatVec( lastverticalw ); in partA__align()
1366 lastverticalw[0] = currentw[lgth2-1]; in partA__align()
1731 FreeFloatVec( lastverticalw ); in partA__align_variousdist()
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H A DSalignmm.c767 wm = lastverticalw[0]; in Atracking_localhom()
770 if( lastverticalw[i] >= wm ) in Atracking_localhom()
772 wm = lastverticalw[i]; in Atracking_localhom()
908 wm = lastverticalw[0]; in Atracking()
911 if( lastverticalw[i] >= wm ) in Atracking()
913 wm = lastverticalw[i]; in Atracking()
1104 FreeFloatVec( lastverticalw ); in A__align()
1228 FreeFloatVec( lastverticalw ); in A__align()
1475 lastverticalw[0] = currentw[lgth2-1]; in A__align()
1869 FreeFloatVec( lastverticalw ); in A__align_variousdist()
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H A DMSalignmm.c206 wm = lastverticalw[0]; in Atracking()
209 if( lastverticalw[i] >= wm ) in Atracking()
211 wm = lastverticalw[i]; in Atracking()
230 wm = lastverticalw[0]; in Atracking()
233 if( lastverticalw[i] >= wm ) in Atracking()
235 wm = lastverticalw[i]; in Atracking()
457 lastverticalw[0] = currentw[lgth2-1]; in MSalignmm_tanni()
562 FreeFloatVec( lastverticalw ); in MSalignmm_tanni()
599 FreeFloatVec( lastverticalw ); in freearrays_rec1()
2182 FreeFloatVec( lastverticalw ); in MSalignmm_tanni_variousdist()
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H A Dsuboptalign11.c157 static double *lastverticalw; /* kufuu sureba iranai */ in suboptalign11() local
222 FreeFloatVec( lastverticalw ); in suboptalign11()
252 lastverticalw = AllocateFloatVec( ll1+2 ); in suboptalign11()
335 lastverticalw[0] = currentw[lgth2-1]; in suboptalign11()
603 lastverticalw[i] = currentw[lgth2-1]; in suboptalign11()
H A DLalignmm.c271 fprintf( stderr, "lastverticalw[%d] = %f\n", i, lastverticalw[i] );
373 double *lastverticalw; /* kufuu sureba iranai */ in MSalign2m2m_rec() local
511 lastverticalw = AllocateFloatVec( ll1+2 ); in MSalign2m2m_rec()
574 lastverticalw[0] = currentw[lgth2-1]; in MSalign2m2m_rec()
702 lastverticalw[i] = currentw[lgth2-1]; in MSalign2m2m_rec()
1220 FreeFloatVec( lastverticalw );
1273 double *lastverticalw; /* kufuu sureba iranai */ in MSalignmm_rec() local
1411 lastverticalw = AllocateFloatVec( ll1+2 ); in MSalignmm_rec()
1474 lastverticalw[0] = currentw[lgth2-1]; in MSalignmm_rec()
1602 lastverticalw[i] = currentw[lgth2-1]; in MSalignmm_rec()
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H A DDalignmm.c659 wm = lastverticalw[0]; in Atracking_localhom()
662 if( lastverticalw[i] >= wm ) in Atracking_localhom()
664 wm = lastverticalw[i]; in Atracking_localhom()
800 wm = lastverticalw[0]; in Atracking()
803 if( lastverticalw[i] >= wm ) in Atracking()
805 wm = lastverticalw[i]; in Atracking()
2814 FreeFloatVec( lastverticalw ); in D__align()
2952 FreeFloatVec( lastverticalw ); in D__align()
3484 lastverticalw[0] = currentw[lgth2-1]; in D__align()
4652 FreeFloatVec( lastverticalw ); in D__align_variousdist()
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