Searched refs:lh_helper (Results 1 – 7 of 7) sorted by relevance
441 LinkHelpStruct *lh_helper=0; in s_BlastEvenGapLinkHSPs() local453 lh_helper = (LinkHelpStruct *) in s_BlastEvenGapLinkHSPs()573 lh_helper[0].ptr = hp_start; in s_BlastEvenGapLinkHSPs()574 lh_helper[0].q_off_trim = 0; in s_BlastEvenGapLinkHSPs()575 lh_helper[0].s_off_trim = 0; in s_BlastEvenGapLinkHSPs()576 lh_helper[0].maxsum1 = -10000; in s_BlastEvenGapLinkHSPs()577 lh_helper[0].next_larger = 0; in s_BlastEvenGapLinkHSPs()664 lh_helper[H_index].ptr = H; in s_BlastEvenGapLinkHSPs()688 lh_helper[1].maxsum1 = -10000; in s_BlastEvenGapLinkHSPs()874 lh_helper[H_index].maxsum1 = MAX(lh_helper[H_index-1].maxsum1, new_sum); in s_BlastEvenGapLinkHSPs()[all …]
11280 LinkHelpStruct *lh_helper=0; in link_hsps() local11295 MemFree(hitlist->lh_helper); in link_hsps()11298 lh_helper= hitlist->lh_helper; in link_hsps()11421 lh_helper[0].ptr = &hp_start; in link_hsps()11422 lh_helper[0].q_off_trim = 0; in link_hsps()11423 lh_helper[0].s_off_trim = 0; in link_hsps()11424 lh_helper[0].maxsum1 = -10000; in link_hsps()11425 lh_helper[0].next_larger = 0; in link_hsps()11514 lh_helper[H_index].ptr = H; in link_hsps()11540 lh_helper[1].maxsum1 = -10000; in link_hsps()[all …]
1052 MemFree( hitlist_array[i]->lh_helper ); in InitHitLists()1053 hitlist_array[i]->lh_helper = NULL; in InitHitLists()
1601 LinkHelpStruct *lh_helper; member
6384 hitlist->lh_helper = MemFree(hitlist->lh_helper); in BlastHitListDestruct()9452 tmp_hitlist->lh_helper = MemFree(tmp_hitlist->lh_helper); in RealBlastGetGappedAlignmentTraceback()