Searched refs:local_reassembly_pileup_files (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/subread/subread-2.0.2-source/src/ |
| H A D | SUBindel.c | 126 HashTable * local_reassembly_pileup_files; in transfer_SAM_to_assembly() local
130 local_reassembly_pileup_files = HashTableCreate(100); in transfer_SAM_to_assembly()
131 HashTableSetDeallocationFunctions(local_reassembly_pileup_files, NULL, NULL); in transfer_SAM_to_assembly()
132 HashTableSetKeyComparisonFunction(local_reassembly_pileup_files, my_strcmp); in transfer_SAM_to_assembly()
133 HashTableSetHashFunction(local_reassembly_pileup_files ,HashTableStringHashFunction); in transfer_SAM_to_assembly()
244 …write_local_reassembly(global_context, local_reassembly_pileup_files, read_anchor_position, read_n… in transfer_SAM_to_assembly()
260 destroy_pileup_table(local_reassembly_pileup_files); in transfer_SAM_to_assembly()
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| H A D | core-indel.h | 143 HashTable * local_reassembly_pileup_files; member
186 void destroy_pileup_table(HashTable* local_reassembly_pileup_files);
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| H A D | core-indel.c | 678 indel_context -> local_reassembly_pileup_files = HashTableCreate(100); in init_indel_tables()
679 indel_context -> local_reassembly_pileup_files -> appendix1 = NULL + max_open_file * 2/ 3; in init_indel_tables()
680 HashTableSetDeallocationFunctions(indel_context -> local_reassembly_pileup_files, NULL, NULL); in init_indel_tables()
681 HashTableSetKeyComparisonFunction(indel_context -> local_reassembly_pileup_files, my_strcmp); in init_indel_tables()
682 …HashTableSetHashFunction(indel_context -> local_reassembly_pileup_files ,HashTableStringHashFuncti… in init_indel_tables()
4310 void destroy_pileup_table(HashTable* local_reassembly_pileup_files) in destroy_pileup_table() argument
4315 for(bucket=0; bucket< local_reassembly_pileup_files -> numOfBuckets; bucket++) in destroy_pileup_table()
4317 cursor = local_reassembly_pileup_files -> bucketArray[bucket]; in destroy_pileup_table()
4329 HashTableDestroy(local_reassembly_pileup_files); in destroy_pileup_table()
4398 HashTable * local_reassembly_pileup_files = indel_context -> local_reassembly_pileup_files; in finalise_long_insertions() local
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