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Searched refs:longInsertLength (Results 1 – 2 of 2) sorted by relevance

/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Apps/
H A Dmeta-velvetg.cc49 metaGraph->setInsertLength( CATEGORIES, longInsertLength, longInsertLengthSD ); in setInsertLengths()
51 << "Ave. = " << longInsertLength << ", SD = " << longInsertLengthSD << endl; in setInsertLengths()
182 longInsertLength = META_VELVET_G_PARAMETER_VALUE_NOT_SPECIFIED; in setDefaultParameters()
448 longInsertLength = atof( val ); in setLongInsertLength()
449 if( longInsertLength <= 0 ){ in setLongInsertLength()
450 …cerr << "[meta-velvetg] Error: Invalid insert length for long reads: " << longInsertLength << endl; in setLongInsertLength()
670 if( isGuessInsertLengthSD( longInsertLength, longInsertLengthSD ) ) in guessInsertLengthSD()
671 longInsertLengthSD = guessInsertLengthSD( longInsertLength ); in guessInsertLengthSD()
H A Dmeta-velvetg.hh54 double longInsertLength; member in MetaVelvetG