Searched refs:longintronanchor (Results 1 – 2 of 2) sorted by relevance
1357 for(uint i=start+longintronanchor;i<end-longintronanchor;i++) { in find_trims()1467 for(uint i=start+longintronanchor;i<end-longintronanchor;i++) { in find_trims_wsign()2597 float lastcov=get_cov(2*s,longintronanchor-1,longintronanchor-1,bpcov); in create_graph()2598 … for(int i=currentstart+longintronanchor;i<(int)currentstart+CHI_THR+(int)longintronanchor;i++) { in create_graph()2616 covend-=longintronanchor; in create_graph()4640 int ssdist=longintronanchor; in process_transfrags()11243 juncsupport=longintronanchor; in build_graphs()13296 int ssdist=longintronanchor; in count_good_junctions()13535 if(anchor<longintronanchor) anchor=longintronanchor; in count_good_junctions()14493 uint anchor=longintronanchor; in print_predcluster()[all …]
33 const uint longintronanchor=25; // I need a higher anchor for long introns -> use a smaller value h… variable