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Searched refs:mMisMatches (Results 1 – 6 of 6) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/
H A Dpsl_record.cpp121 mMatches = mMisMatches = 0; in xInitializeStats()
128 *pPart, mMatches, mMisMatches, mBaseInsertQ, mBaseInsertT); in xInitializeStats()
366 if (key == "num_mismatch" && value.IsInt() && mMisMatches == -1) { in Initialize()
367 mMisMatches = value.GetInt(); in Initialize()
381 if (mMisMatches == -1) { in Finalize()
382 mMisMatches = 0; in Finalize()
H A Dpsl_record.hpp75 int GetMisMatches() const { return mMisMatches; }; in GetMisMatches()
140 int mMisMatches = -1; // number of bases that don't match member in CPslRecord
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/
H A Dpsl_data.cpp59 mMatches = mMisMatches = mRepMatches = mCountN = 0; in xReset()
99 mMisMatches = NStr::StringToInt(columns[mFirstDataColumn + 1]); in Initialize()
175 ostr << "misMatches : " << mMisMatches <<endl; in Dump()
243 pMisMatches->SetValue().SetInt(mMisMatches); in ExportToSeqAlign()
H A Dpsl_data.hpp92 int mMisMatches; member in CPslData
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/readers/
H A Dpsl_data.cpp59 mMatches = mMisMatches = mRepMatches = mCountN = 0; in xReset()
99 mMisMatches = NStr::StringToInt(columns[mFirstDataColumn + 1]); in Initialize()
175 ostr << "misMatches : " << mMisMatches <<endl; in Dump()
243 pMisMatches->SetValue().SetInt(mMisMatches); in ExportToSeqAlign()
H A Dpsl_data.hpp92 int mMisMatches; member in CPslData