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Searched refs:mPointers (Results 1 – 25 of 27) sorted by relevance

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/dports/biology/vcflib/vcflib-1.0.2/smithwaterman/
H A DBandedSmithWaterman.cpp22 , mPointers(NULL) in CBandedSmithWaterman()
51 if(mPointers) delete [] mPointers; in ~CBandedSmithWaterman()
226 mPointers[position].mSizeOfHorizontalGaps = mPointers[position - 1].mSizeOfHorizontalGaps + 1; in CalculateScore()
245 …mPointers[position].mSizeOfVerticalGaps = mPointers[position - mBandwidth - 1].mSizeOfVerticalGaps… in CalculateScore()
258 …else if(mBestScores[column] == totalSimilarityScore) mPointers[position].Direction = Directions… in CalculateScore()
475 if(mPointers) delete [] mPointers; in ReinitializeMatrices()
478 mPointers = new ElementInfo[mCurrentMatrixSize]; in ReinitializeMatrices()
491 uninitialized_fill(mPointers, mPointers + mCurrentMatrixSize, defaultElement); in ReinitializeMatrices()
537 switch(mPointers[currentPosition].Direction){ in Traceback()
539 nVerticalGap = mPointers[currentPosition].mSizeOfVerticalGaps; in Traceback()
[all …]
H A DSmithWatermanGotoh.cpp21 , mPointers(NULL) in CSmithWatermanGotoh()
36 if(mPointers) delete [] mPointers; in ~CSmithWatermanGotoh()
65 if(mPointers) delete [] mPointers; in Align()
72 mPointers = new char[mCurrentMatrixSize]; in Align()
83 memset((char*)mPointers, 0, SIZEOF_CHAR * queryLen); in Align()
84 for(unsigned int i = 1; i < referenceLen; i++) mPointers[i * queryLen] = 0; in Align()
367 if(mBestScores[j] == 0) mPointers[l] = Directions_STOP; in Align()
368 else if(mBestScores[j] == totalSimilarityScore) mPointers[l] = Directions_DIAGONAL; in Align()
369 else if(mBestScores[j] == mQueryGapScores[j]) mPointers[l] = Directions_UP; in Align()
370 else mPointers[l] = Directions_LEFT; in Align()
[all …]
H A DSmithWatermanGotoh.h66 char* mPointers; variable
H A DBandedSmithWaterman.h66 ElementInfo* mPointers; variable
/dports/biology/freebayes/freebayes-1.3.5/vcflib/smithwaterman/
H A DBandedSmithWaterman.cpp22 , mPointers(NULL) in CBandedSmithWaterman()
51 if(mPointers) delete [] mPointers; in ~CBandedSmithWaterman()
226 mPointers[position].mSizeOfHorizontalGaps = mPointers[position - 1].mSizeOfHorizontalGaps + 1; in CalculateScore()
245 …mPointers[position].mSizeOfVerticalGaps = mPointers[position - mBandwidth - 1].mSizeOfVerticalGaps… in CalculateScore()
258 …else if(mBestScores[column] == totalSimilarityScore) mPointers[position].Direction = Directions… in CalculateScore()
475 if(mPointers) delete [] mPointers; in ReinitializeMatrices()
478 mPointers = new ElementInfo[mCurrentMatrixSize]; in ReinitializeMatrices()
491 uninitialized_fill(mPointers, mPointers + mCurrentMatrixSize, defaultElement); in ReinitializeMatrices()
537 switch(mPointers[currentPosition].Direction){ in Traceback()
539 nVerticalGap = mPointers[currentPosition].mSizeOfVerticalGaps; in Traceback()
[all …]
H A DSmithWatermanGotoh.cpp21 , mPointers(NULL) in CSmithWatermanGotoh()
36 if(mPointers) delete [] mPointers; in ~CSmithWatermanGotoh()
65 if(mPointers) delete [] mPointers; in Align()
72 mPointers = new char[mCurrentMatrixSize]; in Align()
83 memset((char*)mPointers, 0, SIZEOF_CHAR * queryLen); in Align()
84 for(unsigned int i = 1; i < referenceLen; i++) mPointers[i * queryLen] = 0; in Align()
367 if(mBestScores[j] == 0) mPointers[l] = Directions_STOP; in Align()
368 else if(mBestScores[j] == totalSimilarityScore) mPointers[l] = Directions_DIAGONAL; in Align()
369 else if(mBestScores[j] == mQueryGapScores[j]) mPointers[l] = Directions_UP; in Align()
370 else mPointers[l] = Directions_LEFT; in Align()
[all …]
H A DSmithWatermanGotoh.h66 char* mPointers; variable
H A DBandedSmithWaterman.h66 ElementInfo* mPointers; variable
/dports/biology/smithwaterman/smithwaterman-2610e259611ae4cde8f03c72499d28f03f6d38a7/
H A DBandedSmithWaterman.cpp22 , mPointers(NULL) in CBandedSmithWaterman()
51 if(mPointers) delete [] mPointers; in ~CBandedSmithWaterman()
226 mPointers[position].mSizeOfHorizontalGaps = mPointers[position - 1].mSizeOfHorizontalGaps + 1; in CalculateScore()
245 …mPointers[position].mSizeOfVerticalGaps = mPointers[position - mBandwidth - 1].mSizeOfVerticalGaps… in CalculateScore()
258 …else if(mBestScores[column] == totalSimilarityScore) mPointers[position].Direction = Directions… in CalculateScore()
475 if(mPointers) delete [] mPointers; in ReinitializeMatrices()
478 mPointers = new ElementInfo[mCurrentMatrixSize]; in ReinitializeMatrices()
491 uninitialized_fill(mPointers, mPointers + mCurrentMatrixSize, defaultElement); in ReinitializeMatrices()
537 switch(mPointers[currentPosition].Direction){ in Traceback()
539 nVerticalGap = mPointers[currentPosition].mSizeOfVerticalGaps; in Traceback()
[all …]
H A DSmithWatermanGotoh.cpp21 , mPointers(NULL) in CSmithWatermanGotoh()
36 if(mPointers) delete [] mPointers; in ~CSmithWatermanGotoh()
65 if(mPointers) delete [] mPointers; in Align()
72 mPointers = new char[mCurrentMatrixSize]; in Align()
83 memset((char*)mPointers, 0, SIZEOF_CHAR * queryLen); in Align()
84 for(unsigned int i = 1; i < referenceLen; i++) mPointers[i * queryLen] = 0; in Align()
367 if(mBestScores[j] == 0) mPointers[l] = Directions_STOP; in Align()
368 else if(mBestScores[j] == totalSimilarityScore) mPointers[l] = Directions_DIAGONAL; in Align()
369 else if(mBestScores[j] == mQueryGapScores[j]) mPointers[l] = Directions_UP; in Align()
370 else mPointers[l] = Directions_LEFT; in Align()
[all …]
H A DSmithWatermanGotoh.h66 char* mPointers; variable
H A DBandedSmithWaterman.h66 ElementInfo* mPointers; variable
/dports/x11-toolkits/mygui/mygui-MyGUI3.4.0/Demos/Demo_Pointers/
H A DResourcePointerContext.cpp36 mPointers[item->findAttribute("name")] = item->getContent(); in deserialization()
44 MyGUI::MapString::iterator item = mPointers.find(_type); in getPointer()
45 if (item != mPointers.end()) in getPointer()
H A DResourcePointerContext.h30 MyGUI::MapString mPointers;
/dports/x11-toolkits/mygui-ogre/mygui-MyGUI3.4.0/Demos/Demo_Pointers/
H A DResourcePointerContext.cpp36 mPointers[item->findAttribute("name")] = item->getContent(); in deserialization()
44 MyGUI::MapString::iterator item = mPointers.find(_type); in getPointer()
45 if (item != mPointers.end()) in getPointer()
H A DResourcePointerContext.h30 MyGUI::MapString mPointers;
/dports/x11-toolkits/mygui-opengl/mygui-MyGUI3.4.0/Demos/Demo_Pointers/
H A DResourcePointerContext.cpp36 mPointers[item->findAttribute("name")] = item->getContent(); in deserialization()
44 MyGUI::MapString::iterator item = mPointers.find(_type); in getPointer()
45 if (item != mPointers.end()) in getPointer()
H A DResourcePointerContext.h30 MyGUI::MapString mPointers;
/dports/x11-toolkits/mygui-dummy/mygui-MyGUI3.4.0/Demos/Demo_Pointers/
H A DResourcePointerContext.cpp36 mPointers[item->findAttribute("name")] = item->getContent(); in deserialization()
44 MyGUI::MapString::iterator item = mPointers.find(_type); in getPointer()
45 if (item != mPointers.end()) in getPointer()
H A DResourcePointerContext.h30 MyGUI::MapString mPointers;
/dports/www/chromium-legacy/chromium-88.0.4324.182/remoting/android/javatests/src/org/chromium/chromoting/
H A DSwipePinchDetectorTest.java29 private MotionEvent.PointerProperties[] mPointers; field in SwipePinchDetectorTest
44 mPointers = new MotionEvent.PointerProperties[] {pointer0, pointer1}; in setUp()
64 MotionEvent event = MotionEvent.obtain(eventTime, eventTime, action, 2, mPointers, in injectEvent()
/dports/www/firefox-legacy/firefox-52.8.0esr/xpcom/base/
H A DnsCycleCollector.cpp403 PtrInfoOrBlock mPointers[EdgeBlockSize]; member
406 mPointers[EdgeBlockSize - 2].block = nullptr; // sentinel in EdgeBlock()
407 mPointers[EdgeBlockSize - 1].block = nullptr; // next block pointer in EdgeBlock()
411 return mPointers[EdgeBlockSize - 1].block; in Next()
415 return &mPointers[0]; in Start()
419 return &mPointers[EdgeBlockSize - 2]; in End()
448 mPointer = (mPointer + 1)->block->mPointers; in operator ++()
458 return (mPointer + 1)->block->mPointers->ptrInfo; in operator *()
/dports/lang/spidermonkey78/firefox-78.9.0/xpcom/base/
H A DnsCycleCollector.cpp410 PtrInfoOrBlock mPointers[EdgeBlockSize]; member
412 mPointers[EdgeBlockSize - 2].block = nullptr; // sentinel in EdgeBlock()
413 mPointers[EdgeBlockSize - 1].block = nullptr; // next block pointer in EdgeBlock()
415 EdgeBlock*& Next() { return mPointers[EdgeBlockSize - 1].block; } in Next()
416 PtrInfoOrBlock* Start() { return &mPointers[0]; } in Start()
417 PtrInfoOrBlock* End() { return &mPointers[EdgeBlockSize - 2]; } in End()
437 mPointer = (mPointer + 1)->block->mPointers; in operator ++()
446 return (mPointer + 1)->block->mPointers->ptrInfo; in operator *()
/dports/lang/spidermonkey60/firefox-60.9.0/xpcom/base/
H A DnsCycleCollector.cpp406 PtrInfoOrBlock mPointers[EdgeBlockSize]; member
408 mPointers[EdgeBlockSize - 2].block = nullptr; // sentinel in EdgeBlock()
409 mPointers[EdgeBlockSize - 1].block = nullptr; // next block pointer in EdgeBlock()
411 EdgeBlock*& Next() { return mPointers[EdgeBlockSize - 1].block; } in Next()
412 PtrInfoOrBlock* Start() { return &mPointers[0]; } in Start()
413 PtrInfoOrBlock* End() { return &mPointers[EdgeBlockSize - 2]; } in End()
433 mPointer = (mPointer + 1)->block->mPointers; in operator ++()
442 return (mPointer + 1)->block->mPointers->ptrInfo; in operator *()
/dports/mail/thunderbird/thunderbird-91.8.0/xpcom/base/
H A DnsCycleCollector.cpp407 PtrInfoOrBlock mPointers[EdgeBlockSize]; member
409 mPointers[EdgeBlockSize - 2].block = nullptr; // sentinel in EdgeBlock()
410 mPointers[EdgeBlockSize - 1].block = nullptr; // next block pointer in EdgeBlock()
412 EdgeBlock*& Next() { return mPointers[EdgeBlockSize - 1].block; } in Next()
413 PtrInfoOrBlock* Start() { return &mPointers[0]; } in Start()
414 PtrInfoOrBlock* End() { return &mPointers[EdgeBlockSize - 2]; } in End()
434 mPointer = (mPointer + 1)->block->mPointers; in operator ++()
443 return (mPointer + 1)->block->mPointers->ptrInfo; in operator *()

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