| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/ |
| H A D | blastp_args.cpp | 61 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CBlastpAppArgs()
62 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CBlastpAppArgs()
63 m_BlastDbArgs->SetIPGFilteringSupport(true); in CBlastpAppArgs()
64 arg.Reset(m_BlastDbArgs); in CBlastpAppArgs()
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| H A D | blastx_args.cpp | 62 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CBlastxAppArgs()
63 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CBlastxAppArgs()
64 m_BlastDbArgs->SetIPGFilteringSupport(true); in CBlastxAppArgs()
65 arg.Reset(m_BlastDbArgs); in CBlastxAppArgs()
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| H A D | kblastp_args.cpp | 54 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, false, false, true)); in CKBlastpAppArgs()
55 m_BlastDbArgs->SetDatabaseMaskingSupport(false); in CKBlastpAppArgs()
56 arg.Reset(m_BlastDbArgs); in CKBlastpAppArgs()
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| H A D | tblastx_args.cpp | 57 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CTblastxAppArgs()
58 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CTblastxAppArgs()
59 arg.Reset(m_BlastDbArgs); in CTblastxAppArgs()
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| H A D | psiblast_args.cpp | 58 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CPsiBlastAppArgs()
59 m_BlastDbArgs->SetIPGFilteringSupport(true); in CPsiBlastAppArgs()
60 arg.Reset(m_BlastDbArgs); in CPsiBlastAppArgs()
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| H A D | blastn_args.cpp | 63 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CBlastnAppArgs()
64 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CBlastnAppArgs()
65 arg.Reset(m_BlastDbArgs); in CBlastnAppArgs()
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| H A D | magicblast_args.cpp | 237 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, false, true)); in CMagicBlastAppArgs()
238 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CMagicBlastAppArgs()
239 arg.Reset(m_BlastDbArgs); in CMagicBlastAppArgs()
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| H A D | tblastn_args.cpp | 63 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CTblastnAppArgs()
64 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CTblastnAppArgs()
65 arg.Reset(m_BlastDbArgs); in CTblastnAppArgs()
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| H A D | igblastn_args.cpp | 73 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, true)); in CIgBlastnAppArgs()
75 arg.Reset(m_BlastDbArgs); in CIgBlastnAppArgs()
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| H A D | rmblastn_args.cpp | 46 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CRMBlastnAppArgs()
47 arg.Reset(m_BlastDbArgs); in CRMBlastnAppArgs()
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| H A D | igblastp_args.cpp | 75 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, true)); in CIgBlastpAppArgs()
77 arg.Reset(m_BlastDbArgs); in CIgBlastpAppArgs()
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| H A D | deltablast_args.cpp | 61 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CDeltaBlastAppArgs()
62 arg.Reset(m_BlastDbArgs); in CDeltaBlastAppArgs()
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| H A D | rpstblastn_args.cpp | 61 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, kIsRpsBlast)); in CRPSTBlastnAppArgs()
62 arg.Reset(m_BlastDbArgs); in CRPSTBlastnAppArgs()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/ |
| H A D | blastp_args.cpp | 61 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CBlastpAppArgs()
62 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CBlastpAppArgs()
63 m_BlastDbArgs->SetIPGFilteringSupport(true); in CBlastpAppArgs()
64 arg.Reset(m_BlastDbArgs); in CBlastpAppArgs()
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| H A D | blastx_args.cpp | 62 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CBlastxAppArgs()
63 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CBlastxAppArgs()
64 m_BlastDbArgs->SetIPGFilteringSupport(true); in CBlastxAppArgs()
65 arg.Reset(m_BlastDbArgs); in CBlastxAppArgs()
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| H A D | kblastp_args.cpp | 54 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, false, false, true)); in CKBlastpAppArgs()
55 m_BlastDbArgs->SetDatabaseMaskingSupport(false); in CKBlastpAppArgs()
56 arg.Reset(m_BlastDbArgs); in CKBlastpAppArgs()
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| H A D | tblastx_args.cpp | 57 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CTblastxAppArgs()
58 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CTblastxAppArgs()
59 arg.Reset(m_BlastDbArgs); in CTblastxAppArgs()
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| H A D | psiblast_args.cpp | 58 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CPsiBlastAppArgs()
59 m_BlastDbArgs->SetIPGFilteringSupport(true); in CPsiBlastAppArgs()
60 arg.Reset(m_BlastDbArgs); in CPsiBlastAppArgs()
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| H A D | blastn_args.cpp | 63 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CBlastnAppArgs()
64 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CBlastnAppArgs()
65 arg.Reset(m_BlastDbArgs); in CBlastnAppArgs()
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| H A D | magicblast_args.cpp | 237 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, false, true)); in CMagicBlastAppArgs()
238 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CMagicBlastAppArgs()
239 arg.Reset(m_BlastDbArgs); in CMagicBlastAppArgs()
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| H A D | tblastn_args.cpp | 63 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CTblastnAppArgs()
64 m_BlastDbArgs->SetDatabaseMaskingSupport(true); in CTblastnAppArgs()
65 arg.Reset(m_BlastDbArgs); in CTblastnAppArgs()
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| H A D | igblastn_args.cpp | 73 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, true)); in CIgBlastnAppArgs()
75 arg.Reset(m_BlastDbArgs); in CIgBlastnAppArgs()
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| H A D | igblastp_args.cpp | 75 m_BlastDbArgs.Reset(new CBlastDatabaseArgs(false, false, true)); in CIgBlastpAppArgs()
77 arg.Reset(m_BlastDbArgs); in CIgBlastpAppArgs()
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| H A D | rmblastn_args.cpp | 46 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CRMBlastnAppArgs()
47 arg.Reset(m_BlastDbArgs); in CRMBlastnAppArgs()
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| H A D | deltablast_args.cpp | 61 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CDeltaBlastAppArgs()
62 arg.Reset(m_BlastDbArgs); in CDeltaBlastAppArgs()
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