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Searched refs:m_Scope (Results 1 – 25 of 340) sorted by relevance

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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objmgr/impl/
H A Dheap_scope.hpp71 return m_Scope.NotEmpty(); in IsSet()
75 return !m_Scope; in IsNull()
78 DECLARE_OPERATOR_BOOL_REF(m_Scope);
82 return m_Scope == scope.m_Scope; in operator ==()
86 return m_Scope != scope.m_Scope; in operator !=()
90 return m_Scope < scope.m_Scope; in operator <()
125 m_Scope.Reset(); in Reset()
130 m_Scope.Swap(scope.m_Scope); in Swap()
135 CRef<CObject> m_Scope; member in CHeapScope
H A Dseq_entry_edit_commands.hpp100 m_RetHandle = Action::Do(m_Scope, m_Handle, m_Data); in Do()
113 m_Scope.SelectNone(m_Handle); in Undo()
125 CScope_Impl& m_Scope; member in CSeq_entry_Select_EditCommand
150 CScope_Impl& m_Scope; member in CSeq_entry_SelectNone_EditCommand
164 : m_Handle(handle), m_Scope(scope), m_Index(-1) {} in CSeq_entry_Remove_EditCommand()
174 CScope_Impl& m_Scope; member in CSeq_entry_Remove_EditCommand
187 : m_Handle(handle), m_Scope(scope) {} in CRemoveTSE_EditCommand()
196 CScope_Impl& m_Scope; member in CRemoveTSE_EditCommand
286 m_AnnotHandle = m_Scope.AttachAnnot(m_Handle, in Do()
301 m_Scope.RemoveAnnot(m_AnnotHandle); in Undo()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objmgr/impl/
H A Dheap_scope.hpp71 return m_Scope.NotEmpty(); in IsSet()
75 return !m_Scope; in IsNull()
78 DECLARE_OPERATOR_BOOL_REF(m_Scope);
82 return m_Scope == scope.m_Scope; in operator ==()
86 return m_Scope != scope.m_Scope; in operator !=()
90 return m_Scope < scope.m_Scope; in operator <()
125 m_Scope.Reset(); in Reset()
130 m_Scope.Swap(scope.m_Scope); in Swap()
135 CRef<CObject> m_Scope; member in CHeapScope
H A Dseq_entry_edit_commands.hpp100 m_RetHandle = Action::Do(m_Scope, m_Handle, m_Data); in Do()
113 m_Scope.SelectNone(m_Handle); in Undo()
125 CScope_Impl& m_Scope; member in CSeq_entry_Select_EditCommand
150 CScope_Impl& m_Scope; member in CSeq_entry_SelectNone_EditCommand
164 : m_Handle(handle), m_Scope(scope), m_Index(-1) {} in CSeq_entry_Remove_EditCommand()
174 CScope_Impl& m_Scope; member in CSeq_entry_Remove_EditCommand
187 : m_Handle(handle), m_Scope(scope) {} in CRemoveTSE_EditCommand()
196 CScope_Impl& m_Scope; member in CRemoveTSE_EditCommand
286 m_AnnotHandle = m_Scope.AttachAnnot(m_Handle, in Do()
301 m_Scope.RemoveAnnot(m_AnnotHandle); in Undo()
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/dports/devel/codeblocks/codeblocks-20.03/src/plugins/contrib/ThreadSearch/
H A DThreadSearchFindData.h39 bool MustSearchInOpenFiles() {return (m_Scope & ScopeOpenFiles) != 0;} in MustSearchInOpenFiles()
40 bool MustSearchInProject () {return (m_Scope & ScopeProjectFiles) != 0;} in MustSearchInProject()
41 bool MustSearchInWorkspace() {return (m_Scope & ScopeWorkspaceFiles) != 0;} in MustSearchInWorkspace()
42 bool MustSearchInDirectory() {return (m_Scope & ScopeDirectoryFiles) != 0;} in MustSearchInDirectory()
43 bool MustSearchInTarget () {return (m_Scope & ScopeTargetFiles) != 0;} in MustSearchInTarget()
51 void SetScope (int scope) {m_Scope = scope;} in SetScope()
62 int GetScope() const {return m_Scope;} in GetScope()
77 int m_Scope; variable
H A DThreadSearchFindData.cpp23 ,m_Scope(ScopeProjectFiles) in ThreadSearchFindData()
38 ,m_Scope (findData.m_Scope) in ThreadSearchFindData()
57 m_Scope = findData.m_Scope; in operator =()
71 m_Scope |= scope; in UpdateSearchScope()
73 m_Scope &= ~scope; in UpdateSearchScope()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/
H A Dheap_scope.cpp59 m_Scope.Reset(scope->m_Impl->m_HeapScope); in BEGIN_SCOPE()
60 _ASSERT(m_Scope); in BEGIN_SCOPE()
63 m_Scope.Reset(); in BEGIN_SCOPE()
70 return static_cast<CScope&>(m_Scope.GetNCObject()); in GetScope()
76 return static_cast<CScope*>(m_Scope.GetNCPointerOrNull()); in GetScopeOrNull()
H A Dseq_loc_mapper.cpp86 : m_Scope(scope) in CScope_Mapper_Sequence_Info()
177 m_Scope(scope) in CSeq_loc_Mapper()
187 m_Scope(scope) in CSeq_loc_Mapper()
198 m_Scope(scope) in CSeq_loc_Mapper()
209 m_Scope(scope) in CSeq_loc_Mapper()
220 m_Scope(scope) in CSeq_loc_Mapper()
232 m_Scope(scope) in CSeq_loc_Mapper()
244 m_Scope(scope) in CSeq_loc_Mapper()
285 m_Scope(scope) in CSeq_loc_Mapper()
328 m_Scope(scope) in CSeq_loc_Mapper()
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H A Dseq_entry_edit_commands.cpp49 : m_Handle(handle), m_Scope(scope) in BEGIN_SCOPE()
66 m_Scope.SelectNone(m_Handle); in Do()
81 m_Scope.SelectSeq(m_Handle, m_BioseqHandle); in Undo()
86 m_Scope.SelectSet(m_Handle, m_BioseqSetHandle); in Undo()
107 m_Scope.RemoveEntry(m_Handle); in Do()
116 m_Scope.AttachEntry(m_ParentHandle, m_Handle, m_Index); in Undo()
137 m_Scope.RemoveTopLevelSeqEntry(tse); in Do()
H A Dprefetch_actions.cpp50 if ( m_Scope.IsNull() ) { in GetScope()
51 m_Scope.Set(new CScope(m_BaseScope->GetObjectManager())); in GetScope()
52 (*m_Scope).AddScope(*m_BaseScope); in GetScope()
54 return m_Scope; in GetScope()
323 : m_Scope(scope), in CPrefetchBioseqActionSource()
331 : m_Scope(scope), in CPrefetchBioseqActionSource()
342 ret.Reset(new CPrefetchBioseq(m_Scope, id)); in GetNextAction()
351 : m_Scope(scope), in CPrefetchFeat_CIActionSource()
361 : m_Scope(scope), in CPrefetchFeat_CIActionSource()
373 ret.Reset(new CPrefetchFeat_CI(m_Scope, id, in GetNextAction()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/
H A Dheap_scope.cpp59 m_Scope.Reset(scope->m_Impl->m_HeapScope); in BEGIN_SCOPE()
60 _ASSERT(m_Scope); in BEGIN_SCOPE()
63 m_Scope.Reset(); in BEGIN_SCOPE()
70 return static_cast<CScope&>(m_Scope.GetNCObject()); in GetScope()
76 return static_cast<CScope*>(m_Scope.GetNCPointerOrNull()); in GetScopeOrNull()
H A Dseq_loc_mapper.cpp86 : m_Scope(scope) in CScope_Mapper_Sequence_Info()
177 m_Scope(scope) in CSeq_loc_Mapper()
187 m_Scope(scope) in CSeq_loc_Mapper()
198 m_Scope(scope) in CSeq_loc_Mapper()
209 m_Scope(scope) in CSeq_loc_Mapper()
220 m_Scope(scope) in CSeq_loc_Mapper()
232 m_Scope(scope) in CSeq_loc_Mapper()
244 m_Scope(scope) in CSeq_loc_Mapper()
285 m_Scope(scope) in CSeq_loc_Mapper()
328 m_Scope(scope) in CSeq_loc_Mapper()
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H A Dseq_entry_edit_commands.cpp49 : m_Handle(handle), m_Scope(scope) in BEGIN_SCOPE()
66 m_Scope.SelectNone(m_Handle); in Do()
81 m_Scope.SelectSeq(m_Handle, m_BioseqHandle); in Undo()
86 m_Scope.SelectSet(m_Handle, m_BioseqSetHandle); in Undo()
107 m_Scope.RemoveEntry(m_Handle); in Do()
116 m_Scope.AttachEntry(m_ParentHandle, m_Handle, m_Index); in Undo()
137 m_Scope.RemoveTopLevelSeqEntry(tse); in Do()
H A Dprefetch_actions.cpp50 if ( m_Scope.IsNull() ) { in GetScope()
51 m_Scope.Set(new CScope(m_BaseScope->GetObjectManager())); in GetScope()
52 (*m_Scope).AddScope(*m_BaseScope); in GetScope()
54 return m_Scope; in GetScope()
323 : m_Scope(scope), in CPrefetchBioseqActionSource()
331 : m_Scope(scope), in CPrefetchBioseqActionSource()
342 ret.Reset(new CPrefetchBioseq(m_Scope, id)); in GetNextAction()
351 : m_Scope(scope), in CPrefetchFeat_CIActionSource()
361 : m_Scope(scope), in CPrefetchFeat_CIActionSource()
373 ret.Reset(new CPrefetchFeat_CI(m_Scope, id, in GetNextAction()
/dports/audio/spiralsynthmodular/spiralmodular-0.2.2/SpiralSound/Plugins/ScopePlugin/
H A DScopePluginGUI.C69 m_Scope = new ScopeWidget(5, 20, 210, 85, "Scope", m_BufSize);
70 m_Scope->color (Info->SCOPE_BG_COLOUR);
71 m_Scope->SetColours (Info->SCOPE_MRK_COLOUR, Info->SCOPE_FG_COLOUR);
107 if (m_GUICH->GetBool ("DataReady")) m_GUICH->GetData ("AudioData", (void*)m_Scope->m_Data);
108 else memset ((void*)m_Scope->m_Data, 0, m_BufSize * sizeof (float));
109 if (!m_Bypass) m_Scope->redraw();
118 m_Scope->SetAttenuation (1.0-(o->value()));
127 m_Scope->SetTimeBase (o->value());
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/cobalt/unit_test/
H A Dcobalt_unit_test.cpp266 static CRef<CScope> m_Scope; member in CMultiAlignerFixture
298 m_Scope.Reset(new CScope(*m_Objmgr)); in x_InitScope()
299 m_Scope->AddDefaults(); in x_InitScope()
358 m_Scope.Reset(); in Finalize()
367 CRef<CScope> CMultiAlignerFixture::m_Scope; member in CMultiAlignerFixture
455 h = m_Scope->GetBioseqHandle(*s.GetId()); in BOOST_FIXTURE_TEST_SUITE()
494 s_MakeBioseqs(seqlocs, m_Scope, bioseqs); in BOOST_AUTO_TEST_CASE()
993 m_Aligner->SetQueries(queries, m_Scope); in BOOST_AUTO_TEST_CASE()
1002 m_Aligner->SetQueries(queries, m_Scope); in BOOST_AUTO_TEST_CASE()
1506 m_Aligner->SetQueries(queries, m_Scope); in BOOST_AUTO_TEST_CASE()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/
H A Dcdregion_validator.cpp215 &m_Scope); in x_ValidateTrans()
352 if (IsDeltaOrFarSeg(m_Feat.GetLocation(), &m_Scope)) { in x_ReportTranslationProblems()
563 result = GetValidatorLocationLabel(*loc, m_Scope); in MapToNTCoords()
1061 m_Scope); in x_ValidateBadMRNAOverlap()
1070 m_Scope); in x_ValidateBadMRNAOverlap()
1079 m_Scope); in x_ValidateBadMRNAOverlap()
1095 m_Scope); in x_ValidateBadMRNAOverlap()
1141 fh = m_Scope.GetSeq_featHandle(m_Feat); in x_HasGoodParent()
1209 mrna_prod = m_Scope.GetBioseqHandle(*mrna_sid); in x_ValidateFarProducts()
1669 if ( GetLength(loc, &m_Scope) <= 5 ) { in x_ValidateProductId()
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H A Dvalidatorp.cpp254 m_Scope = 0; in Reset()
644 if (m_Scope) { in PostErr()
1583 m_Scope.Reset(scope); in Validate()
1585 if (!m_Scope) { in Validate()
1614 m_Scope.Reset(scope); in Validate()
1616 if (!m_Scope) { in Validate()
1640 if (!m_Scope) { in Validate()
2103 if (m_Scope && CValidator::DoesSeqLocContainDuplicateIntervals(loc, *m_Scope)) { in ValidateSeqLoc()
2147 (m_Scope && CValidator::DoesSeqLocContainAdjacentIntervals(loc, *m_Scope))) { in ValidateSeqLoc()
3006 m_Scope->AddDefaults(); in SetScope()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/test/
H A Dtest_objmgr_mt.cpp73 CRef<CScope> m_Scope; member in CTestObjectManager
129 if ( m_Scope ) { in Thread_Run()
132 CTestHelper::TestDataRetrieval(*m_Scope, 0, 0); in Thread_Run()
136 m_Scope->AddTopLevelSeqEntry(*entry1); in Thread_Run()
137 m_Scope->AddTopLevelSeqEntry(*entry2); in Thread_Run()
138 CTestHelper::TestDataRetrieval(*m_Scope, idx, 0); in Thread_Run()
233 m_Scope = new CScope(*m_ObjMgr); in TestApp_Init()
236 m_Scope->AddTopLevelSeqEntry(*entry1); in TestApp_Init()
237 m_Scope->AddTopLevelSeqEntry(*entry2); in TestApp_Init()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/alnmgr/demo/
H A Dpairwise_aln_app.cpp91 mutable CRef<CScope> m_Scope; member in CPairwiseAlnApp
152 if (!m_Scope) { in GetScope()
156 m_Scope = new CScope(*m_ObjMgr); in GetScope()
157 m_Scope->AddDefaults(); in GetScope()
159 return *m_Scope; in GetScope()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/alnmgr/
H A Dseqid_comp.hpp67 CSeqIdBioseqHandleComp(CScope& scope) : m_Scope(scope) {} in CSeqIdBioseqHandleComp()
72 CBioseq_Handle l_bioseq_handle = m_Scope.GetBioseqHandle(*left_seq_id); in operator ()()
73 CBioseq_Handle r_bioseq_handle = m_Scope.GetBioseqHandle(*right_seq_id); in operator ()()
89 CScope& m_Scope; member in CSeqIdBioseqHandleComp
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/alnmgr/
H A Dseqid_comp.hpp67 CSeqIdBioseqHandleComp(CScope& scope) : m_Scope(scope) {} in CSeqIdBioseqHandleComp()
72 CBioseq_Handle l_bioseq_handle = m_Scope.GetBioseqHandle(*left_seq_id); in operator ()()
73 CBioseq_Handle r_bioseq_handle = m_Scope.GetBioseqHandle(*right_seq_id); in operator ()()
89 CScope& m_Scope; member in CSeqIdBioseqHandleComp
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/readers/hgvs/
H A Dpost_process.hpp28 CNormalizeVariant(CScope& scope) : m_Scope(scope) {} in CNormalizeVariant()
33 CScope& m_Scope; member in CNormalizeVariant
45 CValidateVariant(CScope& scope) : m_Scope(scope) {} in CValidateVariant()
56 CScope& m_Scope; member in CValidateVariant
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/util/
H A Dcollection_score.cpp55 CRef<CScope> m_Scope; member in CAlignmentCollectionScore
77 : m_Scope(&scope) in CAlignmentCollectionScore()
83 : m_Scope(new CScope(*CObjectManager::GetInstance())) in CAlignmentCollectionScore()
99 return i->second->Get(const_cast<CScope&>(*m_Scope), coll); in Get()
113 return i->second->Set(const_cast<CScope&>(*m_Scope), coll); in Set()
129 return score->Get(const_cast<CScope&>(*m_Scope), coll); in Get()
144 score->Set(const_cast<CScope&>(*m_Scope), coll); in Set()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/
H A Didmapper_scope.cpp45 : m_Scope(&scope) in CIdMapperScope()
53 : m_Scope(&scope) in CIdMapperScope()
61 CBioseq_Handle bh = m_Scope->GetBioseqHandle(focus_idh); in x_Init()
68 CBioseq_Handle itbh = m_Scope->GetBioseqHandle(it.GetRefSeqid()); in x_Init()

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