Searched refs:makeCris (Results 1 – 16 of 16) sorted by relevance
47 ConcurrentReadInputStream cris=makeCris(ff, outstream); in loadSSU()85 private static ConcurrentReadInputStream makeCris(FileFormat ff, PrintStream outstream){ in makeCris() method in SSUMap
36 cris=makeCris(ff); in ZMWStreamer()72 private ConcurrentReadInputStream makeCris(FileFormat ff){ in makeCris() method in ZMWStreamer
304 final ConcurrentReadInputStream cris=makeCris(); in process()362 private ConcurrentReadInputStream makeCris(){ in makeCris() method in IceCreamMaker
240 final ConcurrentReadInputStream cris=makeCris(); in process()274 private ConcurrentReadInputStream makeCris(){ in makeCris() method in A_Sample
215 final ConcurrentReadInputStream cris=makeCris(); in process()252 private ConcurrentReadInputStream makeCris(){ in makeCris() method in A_Sample_Generator
254 final ConcurrentReadInputStream cris=makeCris(); in process()287 private ConcurrentReadInputStream makeCris(){
137 ConcurrentReadInputStream makeCris(){ in makeCris() method in KeepBestCopy147 final ConcurrentReadInputStream cris=makeCris(); in process()
248 final ConcurrentReadInputStream cris=makeCris(); in process()282 private ConcurrentReadInputStream makeCris(){ in makeCris() method in AdjustHomopolymers
296 final ConcurrentReadInputStream cris=makeCris(); in process()372 private ConcurrentReadInputStream makeCris(){ in makeCris() method in KExpand
264 final ConcurrentReadInputStream cris=makeCris(ff); in process()273 final ConcurrentReadInputStream cris=makeCris(ffalt); in process()342 private ConcurrentReadInputStream makeCris(FileFormat ff){ in makeCris() method in MergeRibo
224 final ConcurrentReadInputStream cris=makeCris(ff); in process()268 private ConcurrentReadInputStream makeCris(FileFormat ff){
253 final ConcurrentReadInputStream cris=makeCris(); in process()299 private ConcurrentReadInputStream makeCris(){
258 final ConcurrentReadInputStream cris=makeCris(); in process()371 private ConcurrentReadInputStream makeCris(){
390 final ConcurrentReadInputStream cris=makeCris(fname); in process()567 private ConcurrentReadInputStream makeCris(String fname){
249 final ConcurrentReadInputStream cris=makeCris(); in process()283 private ConcurrentReadInputStream makeCris(){ in makeCris() method in ApplyVariants
331 final ConcurrentReadInputStream cris=makeCris(ffin); in process()460 private ConcurrentReadInputStream makeCris(FileFormat ff){