Searched refs:manyContigs (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/genomicsdb/ |
| H A D | GenomicsDBImportIntegrationTest.java | 239 …List<SimpleInterval> manyContigs = MANY_CONTIGS_NON_ADJACENT_INTERVALS.stream().map(SimpleInterval… in testGenomicsDBImportMergeContigsManyNonAdjacentContigsToSeveralContigs() local
242 …writeToGenomicsDB(MANY_CONTIGS_VCF, manyContigs, workspace, 0, false, 0, 1, false, false, false, S… in testGenomicsDBImportMergeContigsManyNonAdjacentContigsToSeveralContigs()
244 …checkGenomicsDBAgainstExpected(workspace, manyContigs, EXPECTED_SEVERAL_CONTIGS_VCF, MANY_CONTIGS_… in testGenomicsDBImportMergeContigsManyNonAdjacentContigsToSeveralContigs()
1121 …List<SimpleInterval> manyContigs = MANY_CONTIGS_NON_ADJACENT_INTERVALS.stream().map(SimpleInterval… in testGenomicsDBIncrementalWithManyNonAdjacentContigsToSeveralPartitions() local
1124 …writeToGenomicsDB(MANY_CONTIGS_VCF.subList(0, 1), manyContigs, workspace, 0, false, 0, 1, false, f… in testGenomicsDBIncrementalWithManyNonAdjacentContigsToSeveralPartitions()
1125 …writeToGenomicsDB(MANY_CONTIGS_VCF.subList(1, 2), manyContigs, workspace, 0, false, 0, 1, false, f… in testGenomicsDBIncrementalWithManyNonAdjacentContigsToSeveralPartitions()
1127 …checkGenomicsDBAgainstExpected(workspace, manyContigs, EXPECTED_SEVERAL_CONTIGS_VCF, MANY_CONTIGS_… in testGenomicsDBIncrementalWithManyNonAdjacentContigsToSeveralPartitions()
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