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Searched refs:max_bond_length (Results 1 – 7 of 7) sorted by relevance

/dports/biology/garlic/garlic-1.6/
H A Dcalc_params.c168 configSP->max_bond_length) * in CalculateParameters_()
171 configSP->max_bond_length) * in CalculateParameters_()
175 configSP->max_bond_length) * in CalculateParameters_()
178 configSP->max_bond_length) * in CalculateParameters_()
H A Dprint_config.c117 printf ("maximal bond length: %f\n", configSP->max_bond_length); in PrintConfig_()
H A Dread_config.c142 configSP->max_bond_length = 2.3; in ReadConfig_()
768 if (d > 0.0) configSP->max_bond_length = d; in ReadConfig_()
H A Dtypedefs.h153 double max_bond_length; /* In angstroms */ member
/dports/science/py-scoria/scoria-1.0.5/scoria/
H A DAtomsAndBonds.py74 max_bond_length = numpy.max([
81 ones_to_consider = numpy.nonzero(distances < max_bond_length * 1.2)
101 '. Assuming ' + str(max_bond_length) + '.')
102 bond_dist = max_bond_length
/dports/science/py-pymatgen/pymatgen-2022.0.15/pymatgen/analysis/
H A Dfind_dimension.py67 max_bond_length = ldict[species[i]] + ldict[species[j]] + tolerance
73 if np.linalg.norm(distance_ij) < max_bond_length:
H A Ddimensionality.py433 max_bond_length = ldict[species[i]] + ldict[species[j]] + tolerance
437 if sum(np.linalg.norm(distance_ij, axis=0) < max_bond_length) > 0: