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Searched refs:max_query_advance (Results 1 – 7 of 7) sorted by relevance

/dports/biology/exonerate/exonerate-2.4.0/src/c4/
H A Dc4.h191 gint max_query_advance; /* For convenience */ member
H A Dlayout.c370 if(row->cell_list->len >= model->max_query_advance) in Layout_Row_create()
H A Dc4.c1524 model->max_query_advance = 0; in C4_Model_finalise()
1528 if(model->max_query_advance < transition->advance_query) in C4_Model_finalise()
1529 model->max_query_advance = transition->advance_query; in C4_Model_finalise()
1533 g_assert(model->max_query_advance || model->max_target_advance); in C4_Model_finalise()
H A Dviterbi.c136 <= (viterbi->model->max_query_advance * 6)) in Viterbi_use_reduced_space()
1747 viterbi->model->max_query_advance, in Viterbi_make_Codegen()
H A Dalignment.c294 if(alignment->model->max_query_advance == 3) in AlignmentView_create()
/dports/biology/exonerate/exonerate-2.4.0/src/sdp/
H A Dsdp.c307 g_assert(Lookahead_Mask_WIDTH > model->max_query_advance); in SDP_create()
H A Dscheduler.c1106 spair->scheduler->model->max_query_advance, in Scheduler_Row_create()