Searched refs:minFragmentOverlap (Results 1 – 1 of 1) sorted by relevance
8369 minFragmentOverlap = atoi(argv[27]); in readSummary()8370 else minFragmentOverlap = 1; in readSummary()8372 if(minFragmentOverlap <1){ in readSummary()8373 fiveEndExtension = 1 - minFragmentOverlap; in readSummary()8374 threeEndExtension = 1 - minFragmentOverlap; in readSummary()8375 minFragmentOverlap = 1; in readSummary()9362 minFragmentOverlap = atoi(optarg); in main()9469 if(minFragmentOverlap<1) in main()9471 fiveEndExtension = - minFragmentOverlap + 1; in main()9472 threeEndExtension = - minFragmentOverlap + 1; in main()[all …]