| /dports/devel/py-trimesh/trimesh-3.5.25/trimesh/ray/ |
| H A D | ray_pyembree.py | 81 multiple_hits=True): argument
106 multiple_hits=multiple_hits,
115 multiple_hits=True, argument
163 if multiple_hits or return_locations:
202 if ((not multiple_hits and
230 if multiple_hits:
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| H A D | ray_triangle.py | 32 multiple_hits=True, argument
65 multiple_hits=multiple_hits,
163 multiple_hits=True): argument
266 if multiple_hits:
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| /dports/biology/ncbi-toolkit/ncbi/algo/blast/core/ |
| H A D | blast_extend.c | 42 s_BlastDiagTableNew (Int4 qlen, Boolean multiple_hits, Int4 window_size) in s_BlastDiagTableNew() argument
62 diag_table->multiple_hits = multiple_hits; in s_BlastDiagTableNew()
137 Boolean multiple_hits = (word_params->options->window_size > 0); in BlastExtendWordNew() local
141 s_BlastDiagTableNew(query_length, multiple_hits, in BlastExtendWordNew()
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| H A D | blast_extend.h | 89 Boolean multiple_hits;/**< Used by BlastExtendWordNew to decide whether member
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| H A D | aa_ungapped.c | 214 if (ewp->diag_table->multiple_hits) { in BlastAaWordFinder()
266 if (ewp->diag_table->multiple_hits) { in BlastRPSWordFinder()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/core/ |
| H A D | blast_extend.c | 42 s_BlastDiagTableNew (Int4 qlen, Boolean multiple_hits, Int4 window_size) in s_BlastDiagTableNew() argument
62 diag_table->multiple_hits = multiple_hits; in s_BlastDiagTableNew()
137 Boolean multiple_hits = (word_params->options->window_size > 0); in BlastExtendWordNew() local
141 s_BlastDiagTableNew(query_length, multiple_hits, in BlastExtendWordNew()
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| H A D | aa_ungapped.c | 214 if (ewp->diag_table->multiple_hits) { in BlastAaWordFinder()
266 if (ewp->diag_table->multiple_hits) { in BlastRPSWordFinder()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/core/ |
| H A D | blast_extend.c | 42 s_BlastDiagTableNew (Int4 qlen, Boolean multiple_hits, Int4 window_size) in s_BlastDiagTableNew() argument
62 diag_table->multiple_hits = multiple_hits; in s_BlastDiagTableNew()
137 Boolean multiple_hits = (word_params->options->window_size > 0); in BlastExtendWordNew() local
141 s_BlastDiagTableNew(query_length, multiple_hits, in BlastExtendWordNew()
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| H A D | aa_ungapped.c | 214 if (ewp->diag_table->multiple_hits) { in BlastAaWordFinder()
266 if (ewp->diag_table->multiple_hits) { in BlastRPSWordFinder()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/core/ |
| H A D | blast_extend.h | 89 Boolean multiple_hits;/**< Used by BlastExtendWordNew to decide whether member
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/core/ |
| H A D | blast_extend.h | 89 Boolean multiple_hits;/**< Used by BlastExtendWordNew to decide whether member
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| /dports/biology/ncbi-toolkit/ncbi/tools/ |
| H A D | blastpri.h | 749 …SearchBlkNew PROTO((Int2 wordsize, Int4 qlen, CharPtr dbname, Boolean multiple_hits, BLAST_Score t…
752 …hBlkNewExtra PROTO((Int2 wordsize, Int4 qlen, CharPtr dbname, Boolean multiple_hits, BLAST_Score t…
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| H A D | blast.h | 678 BLAST_ExtendWordParamsPtr BLAST_ExtendWordParamsNew (Int4 qlen, Boolean multiple_hits, Int4 window_…
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| H A D | blastdef.h | 1479 Boolean multiple_hits; member
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| H A D | blast.c | 2657 static Int4 BlastExtendWordSearch PROTO((BlastSearchBlkPtr search, Boolean multiple_hits));
5720 Boolean multiple_hits, options_alloc=FALSE; in BLASTSetUpSearchWithReadDbInternalMult() local
5734 multiple_hits = options->multiple_hits_only; in BLASTSetUpSearchWithReadDbInternalMult()
5763 …search = BlastSearchBlkNewExtra(options->wordsize, query_length, dbname, multiple_hits, 0, options… in BLASTSetUpSearchWithReadDbInternalMult()
5880 Boolean options_alloc=FALSE, multiple_hits; in BLASTSetUpSearchEx() local
5893 multiple_hits = options->multiple_hits_only; in BLASTSetUpSearchEx()
5922 …search = BlastSearchBlkNew(options->wordsize, actual_query_length, NULL, multiple_hits, 0, options… in BLASTSetUpSearchEx()
7007 BlastExtendWordSearch(BlastSearchBlkPtr search, Boolean multiple_hits) in BlastExtendWordSearch() argument
7013 if (multiple_hits == TRUE && search->ewp_params->multiple_hits == FALSE) in BlastExtendWordSearch()
7016 if (multiple_hits == TRUE) in BlastExtendWordSearch()
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| H A D | blastutl.c | 5585 BLAST_ExtendWordParamsNew (Int4 qlen, Boolean multiple_hits, Int4 window_size) in BLAST_ExtendWordParamsNew() argument
5608 ewp_params->multiple_hits = multiple_hits; in BLAST_ExtendWordParamsNew()
6004 BlastSearchBlkNew (Int2 wordsize, Int4 qlen, CharPtr dbname, Boolean multiple_hits, BLAST_Score thr… in BlastSearchBlkNew() argument
6007 …return BlastSearchBlkNewExtra(wordsize, qlen, dbname, multiple_hits, threshold_first, threshold_se… in BlastSearchBlkNew()
6017 BlastSearchBlkNewExtra (Int2 wordsize, Int4 qlen, CharPtr dbname, Boolean multiple_hits, BLAST_Scor… in BlastSearchBlkNewExtra() argument
6112 if (multiple_hits) in BlastSearchBlkNewExtra()
6122 search->ewp_params = BLAST_ExtendWordParamsNew(qlen, multiple_hits, window_size); in BlastSearchBlkNewExtra()
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| /dports/devel/py-trimesh/trimesh-3.5.25/trimesh/ |
| H A D | proximity.py | 337 multiple_hits=True)
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| /dports/biology/ncbi-toolkit/ncbi/biostruc/cdd/ |
| H A D | cddposutil.c | 1996 Boolean multiple_hits, options_alloc=FALSE; in CddSetUpSearchWithReadDb() local
2014 if (options->window_size != 0) multiple_hits = TRUE; in CddSetUpSearchWithReadDb()
2015 else multiple_hits = FALSE; in CddSetUpSearchWithReadDb()
2026 multiple_hits, options->threshold_first, in CddSetUpSearchWithReadDb()
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