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Searched refs:n1_high (Results 1 – 11 of 11) sorted by relevance

/dports/biology/fasta3/fasta-36.3.8/src/
H A Dwork_thr2.c300 if (my_ppst->n1_low > 0 && my_ppst->n1_high < BIGNUM) {
301 sprintf(info_lib_range," (range: %d-%d)",my_ppst->n1_low,my_ppst->n1_high);}
304 else if (my_ppst->n1_high < BIGNUM) {
305 sprintf(info_lib_range," (range: <%d)",my_ppst->n1_high);}
H A Dstructs.h132 int n1_high; /* upper limit on sequence length */ member
H A Dparam.h61 int n1_high; /* sequence length limits */ member
H A Dinitfa.c1172 sscanf(optarg,"%d-%d",&m_msg->n1_low,&m_msg->n1_high); in f_getopt()
1174 m_msg->n1_high = -m_msg->n1_low; in f_getopt()
1177 if (m_msg->n1_high == 0) m_msg->n1_high = BIGNUM; in f_getopt()
1178 if (m_msg->n1_low > m_msg->n1_high) { in f_getopt()
1180 m_msg->n1_low, m_msg->n1_high); in f_getopt()
1182 m_msg->n1_high = BIGNUM; in f_getopt()
1185 ppst->n1_high = m_msg->n1_high; in f_getopt()
H A Ddropnnw2.c166 if (ppst->n1_high == BIGNUM) { in init_work()
167 ppst->n1_high = (int)(1.33 * (float)n0 - 0.5); in init_work()
H A Ddoinit.c259 m_msp->n1_high = ppst->n1_high = BIGNUM; in initenv()
H A Dcomp_lib9.c980 if (pst.n1_low > 0 && pst.n1_high < BIGNUM) in main()
981 sprintf(info_lib_range," (range: %d-%d)",pst.n1_low,pst.n1_high); in main()
984 else if (pst.n1_high < BIGNUM) in main()
985 sprintf(info_lib_range," (range: <%d)",pst.n1_high); in main()
1802 pst.n1_high = m_msg.n1_high; in main()
H A Dcompacc2.c2994 lib_buf2_dp->seq->n1 > ppst->n1_high ) { in buf_do_work()
3147 lib_buf2_dp->seq->n1 > ppst->n1_high ) { in buf_qshuf_work()
3226 lib_buf2_dp->seq->n1 > ppst->n1_high ) { in buf_shuf_work()
H A Dcompacc2e.c3002 lib_buf2_dp->seq->n1 > ppst->n1_high ) { in buf_do_work()
3155 lib_buf2_dp->seq->n1 > ppst->n1_high ) { in buf_qshuf_work()
3234 lib_buf2_dp->seq->n1 > ppst->n1_high ) { in buf_shuf_work()
/dports/biology/fasta3/fasta-36.3.8/doc/
H A Dfasta.options45 case 'M': m_msg->n1_low,&m_msg->n1_high
H A Dreadme.v36243 -M n1_low-n1_high limits.