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Searched refs:nExEeFails (Results 1 – 5 of 5) sorted by relevance

/dports/biology/bowtie2/bowtie2-2.4.4/
H A Dread.h350 nExEes = nExEeSuccs = nExEeFails = in reset()
387 uint64_t nExEeFails; // # extend ungapped alignments run on this read member
H A Daligner_sw_driver.cpp1740 prm.nExEeFails++; in extendSeedsPaired()
2373 assert_gt(prm.nExEeFails, 0); in extendSeedsPaired()
2374 prm.nExEeFails--; in extendSeedsPaired()
/dports/biology/bowtie/bowtie-1.3.1/
H A Dread.h355 nExEes = nExEeSuccs = nExEeFails = in reset()
392 uint64_t nExEeFails; // # extend ungapped alignments run on this read member
/dports/biology/hisat2/hisat2-2.2.1/
H A Dread.h442 nExEes = nExEeSuccs = nExEeFails = in reset()
478 uint64_t nExEeFails; // # extend ungapped alignments run on this read member
H A Daligner_sw_driver.h2266 prm.nExEeFails++; in extendSeedsPaired()
2907 assert_gt(prm.nExEeFails, 0); in extendSeedsPaired()
2908 prm.nExEeFails--; in extendSeedsPaired()