| /dports/biology/p5-BioPerl/BioPerl-1.7.7/bin/ |
| H A D | bp_local_taxonomydb_query | 10 my ($nodesfile,$namesfile);
14 'names:s' => \$namesfile,
20 unless( @ARGV || $nodesfile || $namesfile ) {
28 -namesfile => $namesfile,
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| H A D | bp_taxonomy2tree | 47 my $namesfile = "names.dmp";
54 'a|namesfile:s' => \$namesfile,
61 -namesfile => $namesfile );
|
| /dports/biology/mothur/mothur-1.46.1/source/commands/ |
| H A D | binsequencecommand.cpp | 122 string namesfile = validParameter.validFile(parameters, "name"); in BinSeqCommand() local
123 if (namesfile == "not open") { namesfile = ""; abort = true; } in BinSeqCommand()
124 else if (namesfile == "not found") { namesfile = ""; } in BinSeqCommand()
125 else { current->setNameFile(namesfile); } in BinSeqCommand()
137 …if ((namesfile != "") && (countfile != "")) { m->mothurOut("[ERROR]: you may only use one of the f… in BinSeqCommand()
141 if ((namesfile != "") || (groupfile != "")) { //convert to count in BinSeqCommand()
143 string rootFileName = namesfile; in BinSeqCommand()
150 …CountTable ct; ct.createTable(namesfile, groupfile, nullVector); ct.printCompressedTable(outputFil… in BinSeqCommand()
157 string tempAccnos = namesfile + ".accnos.temp"; in BinSeqCommand()
173 namesfile = ""; groupfile = ""; util.mothurRemove(tempAccnos); in BinSeqCommand()
[all …]
|
| /dports/java/openjdk8/jdk8u-jdk8u312-b07.1/jdk/test/com/sun/security/sasl/ |
| H A D | Cram.java | 45 private static String pwfile, namesfile; field in Cram
50 namesfile = "names.properties"; in main()
62 namesfile = args[i++]; in main()
66 namesfile = "names.properties"; in main()
73 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk8-jre/jdk8u-jdk8u312-b07.1/jdk/test/com/sun/security/sasl/ |
| H A D | Cram.java | 45 private static String pwfile, namesfile; field in Cram
50 namesfile = "names.properties"; in main()
62 namesfile = args[i++]; in main()
66 namesfile = "names.properties"; in main()
73 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile; field in Cram
52 namesfile = "names.properties"; in main()
64 namesfile = args[i++]; in main()
68 namesfile = "names.properties"; in main()
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile; field in Cram
52 namesfile = "names.properties"; in main()
64 namesfile = args[i++]; in main()
68 namesfile = "names.properties"; in main()
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile; field in Cram
52 namesfile = "names.properties"; in main()
64 namesfile = args[i++]; in main()
68 namesfile = "names.properties"; in main()
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile; field in Cram
52 namesfile = "names.properties"; in main()
64 namesfile = args[i++]; in main()
68 namesfile = "names.properties"; in main()
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile;
52 namesfile = "names.properties";
64 namesfile = args[i++];
68 namesfile = "names.properties";
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null);
|
| /dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile; field in Cram
52 namesfile = "names.properties"; in main()
64 namesfile = args[i++]; in main()
68 namesfile = "names.properties"; in main()
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile; field in Cram
52 namesfile = "names.properties"; in main()
64 namesfile = args[i++]; in main()
68 namesfile = "names.properties"; in main()
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/test/jdk/com/sun/security/sasl/ |
| H A D | Cram.java | 47 private static String pwfile, namesfile; field in Cram
52 namesfile = "names.properties"; in main()
64 namesfile = args[i++]; in main()
68 namesfile = "names.properties"; in main()
75 new PropertiesFileCallbackHandler(pwfile, namesfile, null); in main()
|
| /dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/jdk/com/sun/security/sasl/digest/ |
| H A D | AuthNoUtf8.java | 47 private static String pwfile, namesfile, proxyfile; field in AuthNoUtf8
54 namesfile = "names.properties"; in init()
66 namesfile = args[i++]; in init()
74 namesfile = "names.properties"; in init()
86 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | AuthOnly.java | 41 private static String pwfile, namesfile, proxyfile; field in AuthOnly
48 namesfile = "names.properties"; in init()
60 namesfile = args[i++]; in init()
68 namesfile = "names.properties"; in init()
80 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | Unbound.java | 42 private static String pwfile, namesfile, proxyfile; field in Unbound
49 namesfile = "names.properties"; in init()
61 namesfile = args[i++]; in init()
69 namesfile = "names.properties"; in init()
81 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | AuthRealms.java | 47 private static String pwfile, namesfile, proxyfile; field in AuthRealms
54 namesfile = "names.properties"; in init()
66 namesfile = args[i++]; in init()
74 namesfile = "names.properties"; in init()
86 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| /dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/jdk/com/sun/security/sasl/digest/ |
| H A D | AuthOnly.java | 41 private static String pwfile, namesfile, proxyfile; field in AuthOnly
48 namesfile = "names.properties"; in init()
60 namesfile = args[i++]; in init()
68 namesfile = "names.properties"; in init()
80 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | Unbound.java | 42 private static String pwfile, namesfile, proxyfile; field in Unbound
49 namesfile = "names.properties"; in init()
61 namesfile = args[i++]; in init()
69 namesfile = "names.properties"; in init()
81 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | AuthRealms.java | 47 private static String pwfile, namesfile, proxyfile; field in AuthRealms
54 namesfile = "names.properties"; in init()
66 namesfile = args[i++]; in init()
74 namesfile = "names.properties"; in init()
86 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| /dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/jdk/com/sun/security/sasl/digest/ |
| H A D | AuthOnly.java | 41 private static String pwfile, namesfile, proxyfile; field in AuthOnly
48 namesfile = "names.properties"; in init()
60 namesfile = args[i++]; in init()
68 namesfile = "names.properties"; in init()
80 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | Unbound.java | 42 private static String pwfile, namesfile, proxyfile; field in Unbound
49 namesfile = "names.properties"; in init()
61 namesfile = args[i++]; in init()
69 namesfile = "names.properties"; in init()
81 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | AuthNoUtf8.java | 47 private static String pwfile, namesfile, proxyfile; field in AuthNoUtf8
54 namesfile = "names.properties"; in init()
66 namesfile = args[i++]; in init()
74 namesfile = "names.properties"; in init()
86 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| H A D | AuthRealms.java | 47 private static String pwfile, namesfile, proxyfile; field in AuthRealms
54 namesfile = "names.properties"; in init()
66 namesfile = args[i++]; in init()
74 namesfile = "names.properties"; in init()
86 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|
| /dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/jdk/com/sun/security/sasl/digest/ |
| H A D | AuthOnly.java | 41 private static String pwfile, namesfile, proxyfile; field in AuthOnly
48 namesfile = "names.properties"; in init()
60 namesfile = args[i++]; in init()
68 namesfile = "names.properties"; in init()
80 new PropertiesFileCallbackHandler(pwfile, namesfile, proxyfile); in main()
|