/dports/science/plumed/plumed2-2.7.2/src/crystallization/ |
H A D | Gradient.cpp | 76 nbins(3) in Gradient() 91 nbins[0]=tbins[0]; nbins[1]=0; nbins[2]=0; in Gradient() 94 nbins[0]=0; nbins[1]=tbins[0]; nbins[2]=0; in Gradient() 97 nbins[0]=0; nbins[1]=0; nbins[2]=tbins[0]; in Gradient() 100 nbins[0]=tbins[0]; nbins[1]=tbins[1]; nbins[2]=0; in Gradient() 103 nbins[0]=tbins[0]; nbins[1]=0; nbins[2]=tbins[1]; in Gradient() 106 nbins[0]=0; nbins[1]=tbins[0]; nbins[2]=tbins[1]; in Gradient() 109 nbins[0]=tbins[0]; nbins[1]=tbins[1]; nbins[2]=tbins[2]; in Gradient() 118 nquantities = vend + nbins[0] + nbins[1] + nbins[2]; in Gradient() 151 for(unsigned jbead=0; jbead<nbins[idir]; ++jbead) { in calculateAllVolumes() [all …]
|
/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/plugins_unsupported/filter_mutualinfo/ |
H A D | mutual.cpp | 25 nbins = _nbins; in setBins() 26 assert(!(nbins & (nbins-1))); in setBins() 31 histo2D = new unsigned int[nbins*nbins]; in setBins() 32 histoA = new unsigned int[nbins]; in setBins() 33 histoB = new unsigned int[nbins]; in setBins() 42 memset(histoA, 0, nbins*sizeof(int)); in info() 43 memset(histoB, 0, nbins*sizeof(int)); in info() 68 double ab = histo2D[x + nbins*y]; in info() 94 memset(histo2D, 0, nbins*nbins*sizeof(int)); in histogram() 95 int side = 256/nbins; in histogram() [all …]
|
/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/meshlabplugins/filter_mutualinfoxml/ |
H A D | mutual.cpp | 25 nbins = _nbins; in setBins() 26 assert(!(nbins & (nbins-1))); in setBins() 31 histo2D = new unsigned int[nbins*nbins]; in setBins() 32 histoA = new unsigned int[nbins]; in setBins() 33 histoB = new unsigned int[nbins]; in setBins() 42 memset(histoA, 0, nbins*sizeof(int)); in info() 43 memset(histoB, 0, nbins*sizeof(int)); in info() 68 double ab = histo2D[x + nbins*y]; in info() 94 memset(histo2D, 0, nbins*nbins*sizeof(int)); in histogram() 95 int side = 256/nbins; in histogram() [all …]
|
/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/meshlabplugins/edit_mutualcorrs/ |
H A D | mutual.cpp | 25 nbins = _nbins; in setBins() 26 assert(!(nbins & (nbins-1))); in setBins() 31 histo2D = new unsigned int[nbins*nbins]; in setBins() 32 histoA = new unsigned int[nbins]; in setBins() 33 histoB = new unsigned int[nbins]; in setBins() 42 memset(histoA, 0, nbins*sizeof(int)); in info() 43 memset(histoB, 0, nbins*sizeof(int)); in info() 68 double ab = histo2D[x + nbins*y]; in info() 94 memset(histo2D, 0, nbins*nbins*sizeof(int)); in histogram() 95 int side = 256/nbins; in histogram() [all …]
|
/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/meshlabplugins/filter_mutualglobal/ |
H A D | mutual.cpp | 25 nbins = _nbins; in setBins() 26 assert(!(nbins & (nbins-1))); in setBins() 31 histo2D = new unsigned int[nbins*nbins]; in setBins() 32 histoA = new unsigned int[nbins]; in setBins() 33 histoB = new unsigned int[nbins]; in setBins() 42 memset(histoA, 0, nbins*sizeof(int)); in info() 43 memset(histoB, 0, nbins*sizeof(int)); in info() 68 double ab = histo2D[x + nbins*y]; in info() 94 memset(histo2D, 0, nbins*nbins*sizeof(int)); in histogram() 95 int side = 256/nbins; in histogram() [all …]
|
/dports/math/SCIP/scip-7.0.3/applications/CycleClustering/src/ |
H A D | heur_cycgreedy.c | 173 for( i = 0; i < nbins; ++i ) in getTempObj() 219 for( i = 0; i < nbins; ++i ) in assignNextBin() 271 for( i = 0; i < nbins; ++i ) in assignNextBin() 277 for( i = 0; i < nbins; ++i ) in assignNextBin() 321 for( i = 0; i < nbins; ++i ) in assignNextBin() 348 for( i = 0; i < nbins; ++i ) in assignNextBin() 464 nbins = SCIPcycGetNBins(scip); in SCIP_DECL_HEUREXEC() 476 for ( i = 0; i < nbins; ++i ) in SCIP_DECL_HEUREXEC() 495 for( i = 0; i < nbins; ++i ) in SCIP_DECL_HEUREXEC() 527 for( i = 0; i < nbins; ++i ) in SCIP_DECL_HEUREXEC() [all …]
|
H A D | heur_cyckerlin.c | 100 int nbins; in getSolutionValues() local 107 nbins = SCIPcycGetNBins(scip); in getSolutionValues() 111 assert(nbins > 0 && ncluster > 0 && nbins > ncluster); in getSolutionValues() 115 for( i = 0; i < nbins; ++i ) in getSolutionValues() 419 for( i = 0; i < nbins; ++i ) in createSwitchSolution() 431 for( i = 0; i < nbins; ++i ) in createSwitchSolution() 474 nrswitches = nbins; in createSwitchSolution() 532 for( i = 0; i < nbins; ++i ) in createSwitchSolution() 639 int nbins; in runCyckerlin() local 650 assert(nbins >= 0); in runCyckerlin() [all …]
|
H A D | probdata_cyc.c | 209 int nbins = probdata->nbins; in createVariables() local 280 int nbins = probdata->nbins; in createProbSimplifiedTest() local 419 int nbins = probdata->nbins; in createProbSimplified() local 641 int nbins = probdata->nbins; in createProbQP() local 800 int nbins = probdata->nbins; in createProbOnlyEdge() local 931 int nbins = sourcedata->nbins; in SCIP_DECL_PROBTRANS() local 941 (*targetdata)->nbins = sourcedata->nbins; in SCIP_DECL_PROBTRANS() 1152 int nbins; in SCIP_DECL_PROBCOPY() local 1167 nbins = sourcedata->nbins; in SCIP_DECL_PROBCOPY() 1171 (*targetdata)->nbins = nbins; in SCIP_DECL_PROBCOPY() [all …]
|
H A D | heur_redsize.c | 64 int nbins; in SCIPcycAddIncompleteSol() local 69 nbins = SCIPcycGetNBins(scip); in SCIPcycAddIncompleteSol() 77 for( i = 0; i < nbins; ++i ) in SCIPcycAddIncompleteSol() 94 for( i = 0; i < nbins; ++i ) in SCIPcycAddIncompleteSol() 99 SCIPfreeBlockMemoryArray(scip, &solclustering, nbins); in SCIPcycAddIncompleteSol() 187 int nbins; in SCIPapplyRedSize() local 201 nbins = SCIPcycGetNBins(scip); in SCIPapplyRedSize() 206 assert(nbins > 0 && ncluster > 0 && nbins >= ncluster); in SCIPapplyRedSize() 227 for( i = 0; i < nbins; ++i ) in SCIPapplyRedSize() 230 for( j = 0; j < nbins; ++j ) in SCIPapplyRedSize() [all …]
|
/dports/misc/vxl/vxl-3.3.2/contrib/brl/bseg/boxm2/reg/ocl/ |
H A D | boxm2_ocl_reg_mutual_info.cxx | 105 int * joint_histogram_buff= new int[nbins*nbins]; in boxm2_ocl_register_world() 106 for (int k = 0; k<nbins*nbins; k++) joint_histogram_buff[k] = 0; in boxm2_ocl_register_world() 217 kern->set_local_arg(nbins*nbins*sizeof(int)); in boxm2_ocl_register_world() 244 auto * histA = new float[nbins]; in boxm2_ocl_register_world() 245 auto * histB = new float[nbins]; in boxm2_ocl_register_world() 246 for (int k = 0; k<nbins; k++) in boxm2_ocl_register_world() 253 for (int k = 0; k < nbins; k++) in boxm2_ocl_register_world() 254 for (int l = 0; l < nbins; l++) in boxm2_ocl_register_world() 262 joint_histogram_float[k*nbins+l] = (float)joint_histogram_buff[k*nbins+l] / sum; in boxm2_ocl_register_world() 277 for (int k = 0; k < nbins; k++) in boxm2_ocl_register_world() [all …]
|
/dports/science/lammps/lammps-stable_29Sep2021/src/EXTRA-COMPUTE/ |
H A D | compute_pressure_cylinder.cpp | 78 if ((nbins < 1) || (nzbins < 1) || (nbins > 2<<22) || (nzbins > 2<<22)) in ComputePressureCyl() 85 size_array_rows = nbins; in ComputePressureCyl() 88 Pr_all = new double[nbins]; in ComputePressureCyl() 90 Pz_all = new double[nbins]; in ComputePressureCyl() 93 R = new double[nbins]; in ComputePressureCyl() 94 R2 = new double[nbins]; in ComputePressureCyl() 95 PrAinv = new double[nbins]; in ComputePressureCyl() 96 PzAinv = new double[nbins]; in ComputePressureCyl() 97 Rinv = new double[nbins]; in ComputePressureCyl() 100 R2kin = new double[nbins]; in ComputePressureCyl() [all …]
|
/dports/misc/vxl/vxl-3.3.2/contrib/brl/bbas/bsol/ |
H A D | bsol_distance_histogram.cxx | 25 if (!nbins) in bsol_distance_histogram() 30 bin_counts_.resize(nbins, 0.0); in bsol_distance_histogram() 32 weights_.resize(nbins, 0.0); in bsol_distance_histogram() 33 delta_ = max_val/nbins; in bsol_distance_histogram() 40 if (!nbins) in bsol_distance_histogram() 47 weights_.resize(nbins, 0.0); in bsol_distance_histogram() 60 delta_ = (dmax-dmin)/nbins; in bsol_distance_histogram() 306 if (!nbins) in min_val() 314 if (!nbins) in max_val() 322 if (!nbins) in min_count() [all …]
|
/dports/science/py-dipy/dipy-1.4.1/dipy/align/ |
H A D | parzenhist.pyx | 27 def __init__(self, nbins): argument 70 self.nbins = nbins 118 self.joint = np.zeros(shape=(self.nbins, self.nbins)) 308 nbins = self.nbins 311 self.joint_grad = np.zeros((nbins, nbins, n)) 386 nbins = self.nbins 389 self.joint_grad = np.zeros(shape=(nbins, nbins, n)) 485 if bin > nbins - 1 - padding: 486 return nbins - 1 - padding 649 for i in range(nbins): [all …]
|
/dports/multimedia/vmaf/vmaf-2.3.0/matlab/strred/matlabPyrTools/MEX/ |
H A D | histo.c | 29 register int nbins; in mexFunction() local 92 nbins = (int) ceil((mx-origin-PAD*binsize)/binsize) + 1; in mexFunction() 96 nbins = (int) (binsize + 0.5); /* round to int */ in mexFunction() 97 if (nbins == 0) in mexFunction() 103 else if ( mx > (origin+(nbins-1-i)*binsize+PAD*binsize) ) in mexFunction() 104 binsize = (mx-origin)/((nbins-1-i)+PAD); in mexFunction() 108 if (nbins > MAXBINS) in mexFunction() 110 mexPrintf("nbins: %d, MAXBINS: %d\n",nbins,MAXBINS); in mexFunction() 115 plhs[0] = (mxArray *) mxCreateDoubleMatrix(1,nbins,mxREAL); in mexFunction() 124 for (i=0, temp=origin; i<nbins; i++, temp+=binsize) in mexFunction() [all …]
|
/dports/graphics/ossim/ossim-OrchidIsland-2.11.1/src/vpfutil/ |
H A D | vpftidx.c | 368 h.nbins++ ; in create_thematic_index() 382 h.nbins++ ; in create_thematic_index() 398 h.nbins++ ; in create_thematic_index() 416 h.nbins++ ; in create_thematic_index() 433 h.nbins++ ; in create_thematic_index() 449 h.nbins++ ; in create_thematic_index() 474 h.nbins++ ; in create_thematic_index() 544 return ( h.nbins ) ; in create_thematic_index() 673 i = h.nbins ; /* exit */ in read_thematic_index() 681 i = h.nbins ; /* exit */ in read_thematic_index() [all …]
|
/dports/science/plumed/plumed2-2.7.2/src/ves/ |
H A D | GridIntegrationWeights.cpp | 36 std::vector<unsigned int> nbins = grid_pntr->getNbin(); in getIntegrationWeights() local 41 weights_tmp = getOneDimensionalTrapezoidalWeights(nbins[k],dx[k],isPeriodic[k]); in getIntegrationWeights() 76 double dx = (max-min)/(static_cast<double>(nbins)-1.0); in getOneDimensionalIntegrationPointsAndWeights() 77 points.resize(nbins); in getOneDimensionalIntegrationPointsAndWeights() 78 for(unsigned int i=0; i<nbins; i++) {points[i] = min + i*dx;} in getOneDimensionalIntegrationPointsAndWeights() 80 weights = getOneDimensionalTrapezoidalWeights(nbins,dx,false); in getOneDimensionalIntegrationPointsAndWeights() 88 …ntegrationWeights::getOneDimensionalTrapezoidalWeights(const unsigned int nbins, const double dx, … in getOneDimensionalTrapezoidalWeights() argument 89 std::vector<double> weights_1d(nbins); in getOneDimensionalTrapezoidalWeights() 90 for(unsigned int i=1; i<(nbins-1); i++) { in getOneDimensionalTrapezoidalWeights() 95 weights_1d[(nbins-1)]= 0.5*dx; in getOneDimensionalTrapezoidalWeights() [all …]
|
/dports/graphics/py-visvis/visvis-1.13.0/processing/ |
H A D | statistics.py | 191 if nbins is None: 192 nbins = self.best_number_of_bins() 206 def histogram(self, nbins=None): argument 217 if nbins is None: 218 nbins = self.best_number_of_bins() 223 def kde(self, nbins=None, kernel=None): argument 236 if nbins is None: 237 nbins = 4 * best_nbins 257 nbins = max(minbins, min(maxbins, int(nbins))) 260 return nbins [all …]
|
/dports/math/R-cran-sm/sm/R/ |
H A D | utilities.r | 48 "binning" <- function (x, y, breaks, nbins) { argument 49 binning.1d <- function(x, y, breaks, nbins) { argument 66 binning.2d <- function(x, y, breaks, nbins) { argument 122 if (missing(nbins)) 131 else nbins <- nrow(breaks) - 1 135 result <- binning.2d(x, y, breaks = breaks, nbins = nbins) 137 result <- binning.3d(x, y, breaks = breaks, nbins = nbins) 143 if (missing(nbins)) 149 else nbins <- length(breaks) - 1 152 result <- binning.1d(x, y, breaks = breaks, nbins = nbins) [all …]
|
/dports/graphics/py-scikit-image/scikit-image-0.19.0/skimage/filters/ |
H A D | _multiotsu.pyx | 56 thresh_idx=0, nbins=nbins, 80 nbins : int 85 is equal to nbins*(nbins + 1) / 2. 120 idx = nbins 143 nbins : int 173 is equal to nbins*(nbins + 1) / 2. 178 nbins : int 218 nbins=nbins, 229 nbins - 1, nbins)) 272 thresh_idx=0, nbins=nbins, [all …]
|
/dports/biology/bcftools/bcftools-1.14/ |
H A D | bin.c | 35 int nbins; member 46 bin->nbins = nlist; in bin_init() 66 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 67 memmove(bin->bins+1, bin->bins, sizeof(float)*(bin->nbins-1)); in bin_init() 70 if ( fabs(bin->bins[bin->nbins-1] - max) > max_err ) in bin_init() 72 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 73 bin->bins[bin->nbins-1] = max; in bin_init() 85 int bin_get_size(bin_t *bin) { return bin->nbins; } in bin_get_size() 91 if ( bin->bins[bin->nbins-1] < value ) return bin->nbins-1; in bin_get_idx() 94 int imin = 0, imax = bin->nbins - 2; in bin_get_idx()
|
/dports/biology/bio-mocha/bcftools-1.14/ |
H A D | bin.c | 35 int nbins; member 46 bin->nbins = nlist; in bin_init() 66 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 67 memmove(bin->bins+1, bin->bins, sizeof(float)*(bin->nbins-1)); in bin_init() 70 if ( fabs(bin->bins[bin->nbins-1] - max) > max_err ) in bin_init() 72 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 73 bin->bins[bin->nbins-1] = max; in bin_init() 85 int bin_get_size(bin_t *bin) { return bin->nbins; } in bin_get_size() 91 if ( bin->bins[bin->nbins-1] < value ) return bin->nbins-1; in bin_get_idx() 94 int imin = 0, imax = bin->nbins - 2; in bin_get_idx()
|
/dports/biology/py-pysam/pysam-0.18.0/bcftools/ |
H A D | bin.c | 35 int nbins; member 46 bin->nbins = nlist; in bin_init() 66 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 67 memmove(bin->bins+1, bin->bins, sizeof(float)*(bin->nbins-1)); in bin_init() 70 if ( fabs(bin->bins[bin->nbins-1] - max) > max_err ) in bin_init() 72 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 73 bin->bins[bin->nbins-1] = max; in bin_init() 85 int bin_get_size(bin_t *bin) { return bin->nbins; } in bin_get_size() 91 if ( bin->bins[bin->nbins-1] < value ) return bin->nbins-1; in bin_get_idx() 94 int imin = 0, imax = bin->nbins - 2; in bin_get_idx()
|
H A D | bin.c.pysam.c | 37 int nbins; member 48 bin->nbins = nlist; in bin_init() 68 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 69 memmove(bin->bins+1, bin->bins, sizeof(float)*(bin->nbins-1)); in bin_init() 72 if ( fabs(bin->bins[bin->nbins-1] - max) > max_err ) in bin_init() 74 bin->bins = (float*) realloc(bin->bins, (++bin->nbins)*sizeof(float)); in bin_init() 75 bin->bins[bin->nbins-1] = max; in bin_init() 87 int bin_get_size(bin_t *bin) { return bin->nbins; } in bin_get_size() 93 if ( bin->bins[bin->nbins-1] < value ) return bin->nbins-1; in bin_get_idx() 96 int imin = 0, imax = bin->nbins - 2; in bin_get_idx()
|
/dports/science/clipper/clipper-2.1/clipper/core/ |
H A D | resol_basisfn.cpp | 100 const int& nbins = num_params(); in f_s() local 102 const int bin = Util::bound( 0, Util::intf( ftype(nbins) * s_ord.ordinal( s ) ), nbins-1 ); in f_s() 108 const int& nbins = num_params(); in fderiv_s() local 112 const int bin = Util::bound( 0, Util::intf( ftype(nbins) * s_ord.ordinal( s ) ), nbins-1 ); in fderiv_s() 124 const int& nbins = num_params(); in f_s() local 128 const int i0 = Util::bound( 0, i , nbins-1 ); in f_s() 129 const int i1 = Util::bound( 0, i+1, nbins-1 ); in f_s() 135 const int& nbins = num_params(); in fderiv_s() local 141 const int i0 = Util::bound( 0, i , nbins-1 ); in fderiv_s() 154 const int& nbins = num_params(); in f_s() local [all …]
|
/dports/misc/vxl/vxl-3.3.2/contrib/brl/bbas/bpgl/ihog/ |
H A D | ihog_minfo_cost_func.cxx | 17 unsigned nbins) in ihog_minfo_cost_func() argument 26 nbins_(nbins) in ihog_minfo_cost_func() 44 … const ihog_transform_2d& init_xform, bool image1_mask, unsigned nbins) in ihog_minfo_cost_func() argument 53 nbins_(nbins) in ihog_minfo_cost_func() 77 const ihog_transform_2d& init_xform, unsigned nbins) in ihog_minfo_cost_func() argument 88 nbins_(nbins) in ihog_minfo_cost_func() 156 double scl = 1.0/(256.0/nbins); in entropy_diff() 157 vbl_array_2d<double> h(nbins, nbins, 0.0); in entropy_diff() 167 if (id+1>(unsigned)nbins || is+1>(unsigned)nbins) in entropy_diff() 173 for (int r = 0; r<nbins; ++r) in entropy_diff() [all …]
|