Home
last modified time | relevance | path

Searched refs:nbtfiltdo (Results 1 – 5 of 5) sorted by relevance

/dports/biology/bowtie2/bowtie2-2.4.4/
H A Daligner_sw.h406 uint64_t& nbtfiltdo) in merge() argument
414 nbtfiltdo += nbtfiltdo_; in merge()
H A Dbt2_search.cpp1874 nbtfiltdo = 0; in reset()
2640 itoa10<uint64_t>(total ? nbtfiltdo : nbtfiltdo_u, buf); in reportInterval()
2700 nbtfiltdo_u += nbtfiltdo; in mergeIncrementals()
2730 uint64_t nbtfiltdo; member
2918 nbtfiltdo); \
2939 nbtfiltdo); \
3079 uint64_t nbtfiltdo = 0; // TODO: find a new home for these in multiseedSearchWorker() local
4180 uint64_t nbtfiltdo = 0; // TODO: find a new home for these in multiseedSearchWorker_2p5() local
/dports/biology/hisat2/hisat2-2.2.1/
H A Daligner_sw.h404 uint64_t& nbtfiltdo) in merge() argument
412 nbtfiltdo += nbtfiltdo_; in merge()
H A Dhisat_bp.cpp1759 nbtfiltdo = 0; in reset()
2532 itoa10<uint64_t>(total ? nbtfiltdo : nbtfiltdo_u, buf); in reportInterval()
2619 nbtfiltdo_u += nbtfiltdo; in mergeIncrementals()
2649 uint64_t nbtfiltdo; member
2771 nbtfiltdo, \
2795 nbtfiltdo); \
2889 uint64_t nbtfiltdo = 0; // TODO: find a new home for these in multiseedSearchWorker_hisat_bp() local
H A Dhisat2.cpp2093 nbtfiltdo = 0; in reset()
2866 itoa10<uint64_t>(total ? nbtfiltdo : nbtfiltdo_u, buf); in reportInterval()
2953 nbtfiltdo_u += nbtfiltdo; in mergeIncrementals()
2983 uint64_t nbtfiltdo; member
3105 nbtfiltdo, \
3129 nbtfiltdo); \
3219 uint64_t nbtfiltdo = 0; // TODO: find a new home for these in multiseedSearchWorker_hisat2() local