Home
last modified time | relevance | path

Searched refs:new_annot (Results 1 – 25 of 35) sorted by relevance

12

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/
H A Dexternal_annots.cpp95 CRef<CSeq_annot> new_annot = x_GetCompleteSeqAnnot(*annot_it); in x_AddAnnotations() local
96 bioseq.SetAnnot().push_back(new_annot); in x_AddAnnotations()
104 CRef<CSeq_annot> new_annot = Ref(new CSeq_annot()); in x_GetCompleteSeqAnnot() local
107 new_annot->SetId().push_back(id); in x_GetCompleteSeqAnnot()
112 new_annot->SetDb() = annot->GetDb(); in x_GetCompleteSeqAnnot()
116 new_annot->SetName() = annot->GetName(); in x_GetCompleteSeqAnnot()
120 new_annot->SetDesc().Assign(annot->GetDesc()); in x_GetCompleteSeqAnnot()
127 new_annot->SetData().SetFtable().push_back(feat); in x_GetCompleteSeqAnnot()
129 return new_annot; in x_GetCompleteSeqAnnot()
H A Dapply_object.cpp188 CRef<CSeq_annot> new_annot(new CSeq_annot()); in ApplyChange() local
189 new_annot->SetData().SetFtable(); in ApplyChange()
191 ftable = eh.AttachAnnot(*new_annot); in ApplyChange()
194 CSeq_annot_EditHandle new_annot = ftable.GetEditHandle(); in ApplyChange() local
195 new_annot.TakeFeat(feh); in ApplyChange()
221 CRef<CSeq_annot> new_annot(new CSeq_annot()); in ApplyChange() local
222 ftable = eh.AttachAnnot(*new_annot); in ApplyChange()
H A Dcds_fix.cpp1010 CRef<CSeq_annot> new_annot(new CSeq_annot()); in DemoteCDSToNucSeq() local
1011 new_annot->SetData().SetFtable(); in DemoteCDSToNucSeq()
1013 ftable = eh.AttachAnnot(*new_annot); in DemoteCDSToNucSeq()
1017 CSeq_annot_EditHandle new_annot = ftable.GetEditHandle(); in DemoteCDSToNucSeq() local
1018 orig_feat = new_annot.TakeFeat(feh); in DemoteCDSToNucSeq()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/
H A Dexternal_annots.cpp95 CRef<CSeq_annot> new_annot = x_GetCompleteSeqAnnot(*annot_it); in x_AddAnnotations() local
96 bioseq.SetAnnot().push_back(new_annot); in x_AddAnnotations()
104 CRef<CSeq_annot> new_annot = Ref(new CSeq_annot()); in x_GetCompleteSeqAnnot() local
107 new_annot->SetId().push_back(id); in x_GetCompleteSeqAnnot()
112 new_annot->SetDb() = annot->GetDb(); in x_GetCompleteSeqAnnot()
116 new_annot->SetName() = annot->GetName(); in x_GetCompleteSeqAnnot()
120 new_annot->SetDesc().Assign(annot->GetDesc()); in x_GetCompleteSeqAnnot()
127 new_annot->SetData().SetFtable().push_back(feat); in x_GetCompleteSeqAnnot()
129 return new_annot; in x_GetCompleteSeqAnnot()
H A Dapply_object.cpp188 CRef<CSeq_annot> new_annot(new CSeq_annot()); in ApplyChange() local
189 new_annot->SetData().SetFtable(); in ApplyChange()
191 ftable = eh.AttachAnnot(*new_annot); in ApplyChange()
194 CSeq_annot_EditHandle new_annot = ftable.GetEditHandle(); in ApplyChange() local
195 new_annot.TakeFeat(feh); in ApplyChange()
221 CRef<CSeq_annot> new_annot(new CSeq_annot()); in ApplyChange() local
222 ftable = eh.AttachAnnot(*new_annot); in ApplyChange()
H A Dcds_fix.cpp1010 CRef<CSeq_annot> new_annot(new CSeq_annot()); in DemoteCDSToNucSeq() local
1011 new_annot->SetData().SetFtable(); in DemoteCDSToNucSeq()
1013 ftable = eh.AttachAnnot(*new_annot); in DemoteCDSToNucSeq()
1017 CSeq_annot_EditHandle new_annot = ftable.GetEditHandle(); in DemoteCDSToNucSeq() local
1018 orig_feat = new_annot.TakeFeat(feh); in DemoteCDSToNucSeq()
/dports/graphics/mupdf/mupdf-1.18.0-source/platform/gl/
H A Dgl-annotate.c503 static void new_annot(int type) in new_annot() function
875 if (ui_popup_item("Text")) new_annot(PDF_ANNOT_TEXT); in do_annotate_panel()
877 if (ui_popup_item("Stamp")) new_annot(PDF_ANNOT_STAMP); in do_annotate_panel()
878 if (ui_popup_item("Caret")) new_annot(PDF_ANNOT_CARET); in do_annotate_panel()
879 if (ui_popup_item("Ink")) new_annot(PDF_ANNOT_INK); in do_annotate_panel()
880 if (ui_popup_item("Square")) new_annot(PDF_ANNOT_SQUARE); in do_annotate_panel()
881 if (ui_popup_item("Circle")) new_annot(PDF_ANNOT_CIRCLE); in do_annotate_panel()
882 if (ui_popup_item("Line")) new_annot(PDF_ANNOT_LINE); in do_annotate_panel()
883 if (ui_popup_item("Polygon")) new_annot(PDF_ANNOT_POLYGON); in do_annotate_panel()
890 if (ui_popup_item("Redact")) new_annot(PDF_ANNOT_REDACT); in do_annotate_panel()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/sequence/
H A Drestriction.cpp625 CRef<CSeq_annot> new_annot(new CSeq_annot); in GetAnnot() local
628 new_annot->SetNameDesc(title); in GetAnnot()
629 new_annot->SetTitleDesc(title); in GetAnnot()
630 new_annot->SetCreateDate(now); in GetAnnot()
633 new_annot->SetDesc().Set().push_back(region); in GetAnnot()
634 annot.push_back(new_annot); in GetAnnot()
/dports/print/tex-dvipdfmx/texlive-20150521-source/texk/dvipdfm-x/
H A Dpdfdoc.h117 int new_annot);
/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/pdfium/fpdfsdk/
H A Dfpdf_annot_embeddertest.cpp400 ScopedFPDFAnnotation new_annot(FPDFPage_GetAnnot(page, 1)); in TEST_F() local
401 ASSERT_TRUE(new_annot); in TEST_F()
402 EXPECT_EQ(FPDF_ANNOT_UNDERLINE, FPDFAnnot_GetSubtype(new_annot.get())); in TEST_F()
405 FPDFAnnot_GetAttachmentPoints(new_annot.get(), 0, &new_quadpoints)); in TEST_F()
1179 ScopedFPDFAnnotation new_annot(FPDFPage_GetAnnot(page, 0)); in TEST_F() local
1183 FPDFAnnot_GetValueType(new_annot.get(), pdfium::annotation::kM)); in TEST_F()
1185 new_annot.get(), pdfium::annotation::kM, nullptr, 0); in TEST_F()
1189 FPDFAnnot_GetStringValue(new_annot.get(), pdfium::annotation::kM, in TEST_F()
1337 ScopedFPDFAnnotation new_annot(FPDFPage_GetAnnot(page, 0)); in TEST_F() local
1342 new_annot.get(), FPDF_ANNOT_APPEARANCEMODE_ROLLOVER, nullptr, 0); in TEST_F()
[all …]
/dports/devel/pytype/pytype-2021.9.9/pytype/
H A Dannotations_util.py86 new_annot = annot.copy()
87 new_annot.module = module
88 return new_annot
/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/pdfium/fpdfsdk/
H A Dfpdf_annot_embeddertest.cpp698 ScopedFPDFAnnotation new_annot(FPDFPage_GetAnnot(page, 1)); in TEST_F() local
699 ASSERT_TRUE(new_annot); in TEST_F()
700 EXPECT_EQ(FPDF_ANNOT_UNDERLINE, FPDFAnnot_GetSubtype(new_annot.get())); in TEST_F()
703 FPDFAnnot_GetAttachmentPoints(new_annot.get(), 0, &new_quadpoints)); in TEST_F()
1497 ScopedFPDFAnnotation new_annot(FPDFPage_GetAnnot(page, 0)); in TEST_F() local
1501 FPDFAnnot_GetValueType(new_annot.get(), pdfium::annotation::kM)); in TEST_F()
1503 new_annot.get(), pdfium::annotation::kM, nullptr, 0); in TEST_F()
1507 FPDFAnnot_GetStringValue(new_annot.get(), pdfium::annotation::kM, in TEST_F()
1655 ScopedFPDFAnnotation new_annot(FPDFPage_GetAnnot(page, 0)); in TEST_F() local
1660 new_annot.get(), FPDF_ANNOT_APPEARANCEMODE_ROLLOVER, nullptr, 0); in TEST_F()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/
H A Dscope.cpp626 CSeq_annot& old_annot, CSeq_annot& new_annot) in ReplaceAnnot() argument
636 eh.AttachAnnot(new_annot); in ReplaceAnnot()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/
H A Dscope.cpp626 CSeq_annot& old_annot, CSeq_annot& new_annot) in ReplaceAnnot() argument
636 eh.AttachAnnot(new_annot); in ReplaceAnnot()
/dports/print/xreader/xreader-3.2.2/backend/pdf/
H A Dev-poppler.cc3322 PopplerAnnot *new_annot = NULL; in pdf_document_annotations_save_annotation() local
3334 new_annot = poppler_annot_text_markup_new_highlight (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3337 new_annot = poppler_annot_text_markup_new_strikeout (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3340 new_annot = poppler_annot_text_markup_new_underline (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3343 new_annot = poppler_annot_text_markup_new_squiggly (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3349 copy_poppler_annot (poppler_annot, new_annot); in pdf_document_annotations_save_annotation()
3355 poppler_page_add_annot (poppler_page, new_annot); in pdf_document_annotations_save_annotation()
3358 new_annot, in pdf_document_annotations_save_annotation()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/unit_test_util/
H A Dunit_test_util.cpp360 CRef<objects::CSeq_annot> new_annot(new objects::CSeq_annot()); in AddFeat() local
361 entry->SetSeq().SetAnnot().push_back(new_annot); in AddFeat()
362 annot = new_annot; in AddFeat()
369 CRef<objects::CSeq_annot> new_annot(new objects::CSeq_annot()); in AddFeat() local
370 entry->SetSet().SetAnnot().push_back(new_annot); in AddFeat()
371 annot = new_annot; in AddFeat()
/dports/graphics/evince/evince-41.3/backend/pdf/
H A Dev-poppler.c3883 PopplerAnnot *new_annot = NULL; in pdf_document_annotations_save_annotation() local
3895 new_annot = poppler_annot_text_markup_new_highlight (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3898 new_annot = poppler_annot_text_markup_new_strikeout (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3901 new_annot = poppler_annot_text_markup_new_underline (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3904 new_annot = poppler_annot_text_markup_new_squiggly (pdf_document->document, &rect, quads); in pdf_document_annotations_save_annotation()
3910 copy_poppler_annot (poppler_annot, new_annot); in pdf_document_annotations_save_annotation()
3916 poppler_page_add_annot (poppler_page, new_annot); in pdf_document_annotations_save_annotation()
3919 new_annot, in pdf_document_annotations_save_annotation()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objmgr/
H A Dscope.hpp618 CSeq_annot& old_annot, CSeq_annot& new_annot);
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objmgr/
H A Dscope.hpp618 CSeq_annot& old_annot, CSeq_annot& new_annot);
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/unit_test/
H A Dunit_test_autodef.cpp535 CRef<CSeq_annot> new_annot(new CSeq_annot()); in AddFeat() local
536 entry->SetSeq().SetAnnot().push_back(new_annot); in AddFeat()
537 annot = new_annot; in AddFeat()
544 CRef<CSeq_annot> new_annot(new CSeq_annot()); in AddFeat() local
545 entry->SetSet().SetAnnot().push_back(new_annot); in AddFeat()
546 annot = new_annot; in AddFeat()
/dports/deskutils/calibre/calibre-src-5.34.0/src/calibre/db/
H A Dbackend.py1891 new_annot = {'removed': True, 'timestamp': ts, 'type': annot_type}
1894 new_annot['uuid'] = uuid
1896 new_annot['title'] = annot_data['title']
1897 replacements.append((json.dumps(new_annot), timestamp, annot_id))
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objmgr/impl/
H A Ddata_source.hpp169 CSeq_annot& new_annot);
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objmgr/impl/
H A Ddata_source.hpp169 CSeq_annot& new_annot);
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/flatfile/
H A Dgb_ascii.cpp2255 CRef<objects::CSeq_annot> new_annot(new objects::CSeq_annot); in CheckFeatSeqLoc() local
2256 new_annot->SetData().SetFtable().swap(feats_no_id); in CheckFeatSeqLoc()
2257 parts->SetAnnot().push_back(new_annot); in CheckFeatSeqLoc()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/
H A Dfeature.cpp3961 CRef<CSeq_annot> new_annot(new CSeq_annot()); in PromoteCDSToNucProtSet() local
3962 new_annot->SetData().SetFtable(); in PromoteCDSToNucProtSet()
3964 ftable = h.AttachAnnot(*new_annot); in PromoteCDSToNucProtSet()
3968 CSeq_annot_EditHandle new_annot = ftable.GetEditHandle(); in PromoteCDSToNucProtSet() local
3969 orig_feat = new_annot.TakeFeat(feh); in PromoteCDSToNucProtSet()

12