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Searched refs:new_hsp_array (Results 1 – 5 of 5) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/algo/blast/core/
H A Dblast_hits.c2638 BlastHSP** new_hsp_array; in s_BlastHSPListsCombineByScore() local
2656 new_hsp_array = (BlastHSP**) in s_BlastHSPListsCombineByScore()
2685 combined_hsp_list->hsp_array = new_hsp_array; in s_BlastHSPListsCombineByScore()
2717 BlastHSP** new_hsp_array; in Blast_HSPListAppend() local
2718 new_hsp_array = (BlastHSP**) in Blast_HSPListAppend()
2722 if (new_hsp_array) { in Blast_HSPListAppend()
2724 combined_hsp_list->hsp_array = new_hsp_array; in Blast_HSPListAppend()
2755 BlastHSP** new_hsp_array; in Blast_HSPListsMerge() local
2898 new_hsp_array = (BlastHSP**) in Blast_HSPListsMerge()
2901 if (new_hsp_array == NULL) { in Blast_HSPListsMerge()
[all …]
H A Dblast_engine.c446 BlastHSP** new_hsp_array = NULL; in s_WriteHSPsForChunk() local
489 new_hsp_array = calloc(new_allocated, sizeof(BlastHSP*)); in s_WriteHSPsForChunk()
490 if (!new_hsp_array) { in s_WriteHSPsForChunk()
494 new_hsp_array[n++] = Blast_HSPClone(hsp_array[i]); in s_WriteHSPsForChunk()
512 hsp_list->hsp_array = new_hsp_array; in s_WriteHSPsForChunk()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/core/
H A Dblast_hits.c2746 BlastHSP** new_hsp_array; in s_BlastHSPListsCombineByScore() local
2764 new_hsp_array = (BlastHSP**) in s_BlastHSPListsCombineByScore()
2793 combined_hsp_list->hsp_array = new_hsp_array; in s_BlastHSPListsCombineByScore()
2825 BlastHSP** new_hsp_array; in Blast_HSPListAppend() local
2826 new_hsp_array = (BlastHSP**) in Blast_HSPListAppend()
2830 if (new_hsp_array) { in Blast_HSPListAppend()
2832 combined_hsp_list->hsp_array = new_hsp_array; in Blast_HSPListAppend()
2863 BlastHSP** new_hsp_array; in Blast_HSPListsMerge() local
3006 new_hsp_array = (BlastHSP**) in Blast_HSPListsMerge()
3009 if (new_hsp_array == NULL) { in Blast_HSPListsMerge()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/core/
H A Dblast_hits.c2746 BlastHSP** new_hsp_array; in s_BlastHSPListsCombineByScore() local
2764 new_hsp_array = (BlastHSP**) in s_BlastHSPListsCombineByScore()
2793 combined_hsp_list->hsp_array = new_hsp_array; in s_BlastHSPListsCombineByScore()
2825 BlastHSP** new_hsp_array; in Blast_HSPListAppend() local
2826 new_hsp_array = (BlastHSP**) in Blast_HSPListAppend()
2830 if (new_hsp_array) { in Blast_HSPListAppend()
2832 combined_hsp_list->hsp_array = new_hsp_array; in Blast_HSPListAppend()
2863 BlastHSP** new_hsp_array; in Blast_HSPListsMerge() local
3006 new_hsp_array = (BlastHSP**) in Blast_HSPListsMerge()
3009 if (new_hsp_array == NULL) { in Blast_HSPListsMerge()
[all …]
/dports/biology/ncbi-toolkit/ncbi/tools/
H A Dblast.c6303 BLAST_HSPPtr PNTR new_hsp_array; in BLASTMergeHitLists() local
6395 new_hsp_array = (BLAST_HSPPtr PNTR) in BLASTMergeHitLists()
6397 if (new_hsp_array == NULL) { in BLASTMergeHitLists()
6401 hitlist1->hsp_array = new_hsp_array; in BLASTMergeHitLists()
6419 new_hsp_array = (BLAST_HSP**) in BLASTMergeHitLists()
6431 new_hsp_array[index] = hitlist1->hsp_array[index1]; in BLASTMergeHitLists()
6434 new_hsp_array[index] = hitlist2->hsp_array[index2]; in BLASTMergeHitLists()
6449 hitlist1->hsp_array = new_hsp_array; in BLASTMergeHitLists()