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Searched refs:new_ldsk (Results 1 – 3 of 3) sorted by relevance

/dports/biology/phyml/phyml-3.3.20200621/src/
H A Dmcmc.c7530 new_disk[j]->ldsk = new_ldsk[j]; in MCMC_PHYREX_Insert_Hit()
7610 Free_Ldisk(new_ldsk[j]); in MCMC_PHYREX_Insert_Hit()
7622 Free(new_ldsk); in MCMC_PHYREX_Insert_Hit()
9281 new_disk->ldsk = new_ldsk; in MCMC_PHYREX_Indel_Hit_Serial()
9366 Free_Ldisk(new_ldsk); in MCMC_PHYREX_Indel_Hit_Serial()
9702 t_ldsk *new_ldsk,*target_ldsk; in MCMC_PHYREX_Add_Remove_Jump() local
9719 new_ldsk = NULL; in MCMC_PHYREX_Add_Remove_Jump()
9769 target_disk->ldsk = new_ldsk; in MCMC_PHYREX_Add_Remove_Jump()
9774 new_ldsk->prev->next[dir_next] = new_ldsk; in MCMC_PHYREX_Add_Remove_Jump()
9775 target_ldsk->prev = new_ldsk; in MCMC_PHYREX_Add_Remove_Jump()
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H A Dslfv.c823 t_ldsk *ldsk,**ldsk_a_pop,**ldsk_a_samp,**ldsk_a_tmp,**ldsk_a_tips,*new_ldsk; in SLFV_Simulate_Forward_Core() local
1036 new_ldsk = PHYREX_Make_Lindisk_Node(n_dim); in SLFV_Simulate_Forward_Core()
1037 PHYREX_Init_Lindisk_Node(new_ldsk,new_disk,n_dim); in SLFV_Simulate_Forward_Core()
1038 Push_Bottom_Linked_List(new_ldsk,&ldsk_list,NO); in SLFV_Simulate_Forward_Core()
1043 new_disk->ldsk_a[n_survive+i] = new_ldsk; in SLFV_Simulate_Forward_Core()
1049 … case SLFV_UNIFORM: { PHYREX_Runif_Rectangle_Overlap(new_ldsk,new_disk,mmod); break; } in SLFV_Simulate_Forward_Core()
1050 case SLFV_GAUSSIAN: { PHYREX_Rnorm_Trunc(new_ldsk,new_disk,mmod); break; } in SLFV_Simulate_Forward_Core()
1054 new_ldsk->prev = disk->ldsk_a[parent_id]; in SLFV_Simulate_Forward_Core()
H A Dio.c6184 t_ldsk *new_ldsk,*root_ldsk,*ldsk; in PHYREX_Input_Tree_Structure() local
6204 new_ldsk = NULL; in PHYREX_Input_Tree_Structure()
6249 new_ldsk = PHYREX_Make_Lindisk_Node(n_dim); in PHYREX_Input_Tree_Structure()
6250 strcpy(new_ldsk->coord->id,tk); in PHYREX_Input_Tree_Structure()
6252 disk->ldsk->next[disk->ldsk->n_next-1] = new_ldsk; in PHYREX_Input_Tree_Structure()
6253 disk->ldsk_a[disk->ldsk->n_next-1] = new_ldsk; in PHYREX_Input_Tree_Structure()
6254 new_ldsk->prev = disk->ldsk; in PHYREX_Input_Tree_Structure()